chr8 : 21,786,596 21,787,154
558 bp 70 TFs 1 linked gene
This 558 bp open chromatin element is linked to GFRA2 and is bound by 70 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GFRA2 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:21,781,596 – 21,792,154
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 455 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 253 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 385 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 192 bp overlap
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 213 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 558 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 254 bp overlap
BRD4 6 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 261 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 159 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 344 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 142 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 463 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 299 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 217 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 147 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 151 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 199 bp overlap
CTCF 19 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 228 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 153 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 241 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 263 bp overlap
ChIP SK-N-SH ENCFF731NJX 251 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 108 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 149 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 184 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 187 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 176 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 173 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 195 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 143 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 113 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 186 bp overlap
ChIP nephron ENCFF972IQB 302 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 373 bp overlap
ChIP neural cell ENCFF335ADI 405 bp overlap
ChIP thyroid gland ENCFF204HWS 310 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 199 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 219 bp overlap
EZH2 23 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 285 bp overlap
ChIP GM23338 ENCFF613YON 385 bp overlap
ChIP H1 ENCFF232NZA 186 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 395 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 269 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 268 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 245 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 541 bp overlap
ChIP HepG2 ENCFF912EIW 558 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 456 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 554 bp overlap
ChIP T98G GSE112240.EZH2.T98G 285 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 558 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 383 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 558 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 558 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 380 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 497 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 125 bp overlap
ChIP fibroblast of lung ENCFF479BAW 498 bp overlap
ChIP keratinocyte ENCFF070STK 539 bp overlap
ChIP keratinocyte ENCFF070STK 337 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 406 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 285 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 457 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 558 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 533 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 246 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 308 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 480 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 281 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 411 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 337 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 325 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 317 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 175 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 260 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 320 bp overlap
KLF17 3 datasets
ChIP HEK293 ENCFF658MHR 425 bp overlap
ChIP HEK293 ENCFF658MHR 222 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 412 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 212 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 222 bp overlap
MAZ 4 datasets
ChIP HEK293 ENCFF994GSG 354 bp overlap
ChIP HEK293 ENCFF994GSG 558 bp overlap
ChIP HEK293 ENCFF994GSG 359 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 522 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 215 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 56 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 271 bp overlap
MXI1 2 datasets
ChIP neural ENCSR934NHU.MXI1.neural 427 bp overlap
ChIP neural cell ENCFF623HQN 494 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 398 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 286 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 526 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 346 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 368 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR116TFA.NR3C1.A-549 124 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 250 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 323 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 228 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 312 bp overlap
POLR2A 1 dataset
ChIP thyroid gland ENCFF979LRR 367 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 471 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 285 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 298 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 383 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 221 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 340 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 164 bp overlap
ChIP neural cell ENCFF882LXX 225 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 189 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 170 bp overlap
SMARCA4 5 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 391 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 558 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 490 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 195 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 134 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 285 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 191 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 451 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 159 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 259 bp overlap
SUZ12 8 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 487 bp overlap
ChIP H1 ENCFF507HGF 269 bp overlap
ChIP H1 ENCFF881NFR 430 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 95 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 426 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 309 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 243 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 204 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 125 bp overlap
TBP 1 dataset
ChIP H1 ENCFF859IIO 297 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 537 bp overlap
ChIP HEK293 ENCFF865LIO 59 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 459 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 479 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 338 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 135 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 171 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 379 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 260 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 360 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 462 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 141 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 147 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 489 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 368 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 151 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 338 bp overlap