chr1 : 157,162,009 157,162,557
548 bp 87 TFs 2 linked genes
This 548 bp open chromatin element is linked to ETV3 and ARHGEF11 and is bound by 87 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ETV3 23.8 kb Distal Multiome
ARHGEF11 116.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:157,157,009 – 157,167,557
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 120 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 406 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 98 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 534 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 299 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
E2F1 1 dataset
Motif DE_60h DE_60h-E2F1_MA0024.3 12 bp overlap
E2F2 1 dataset
Motif DE_60h DE_60h-E2F2_MA0864.3 13 bp overlap
E2F4 1 dataset
Motif DE_60h DE_60h-E2F4_MA0470.3 13 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 247 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 237 bp overlap
ChIP DE DE-FOXA2-2 346 bp overlap
GATA1::TAL1 3 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 251 bp overlap
ChIP DE DE-GATA4-2 368 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 2 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 272 bp overlap
ChIP DE DE-GATA6-2 381 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 317 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 422 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 404 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 191 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 363 bp overlap
GRHL2 6 datasets
ChIP HBE GSE46194.GRHL2.HBE 116 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 137 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 174 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 142 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 118 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 88 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 389 bp overlap
ChIP H1 ENCFF353UJQ 548 bp overlap
ChIP H1 ENCFF353UJQ 367 bp overlap
HMBOX1 1 dataset
Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 208 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 261 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 147 bp overlap
JUND 1 dataset
ChIP H1 ENCFF468JZD 170 bp overlap
Lhx3 1 dataset
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCFF913ACQ 295 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 425 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 221 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 200 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 294 bp overlap
ChIP H1 ENCFF566JSR 297 bp overlap
ChIP H1 ENCFF833NJP 250 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 468 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 156 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 548 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 386 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 205 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 102 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 97 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP H1 ENCFF429RUE 135 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RORA 1 dataset
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 393 bp overlap
SIX1 1 dataset
Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap
SMAD2 3 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 397 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 229 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 435 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 548 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 267 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 436 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 548 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 548 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 548 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 451 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 119 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 68 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 58 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 160 bp overlap
SOX2 2 datasets
ChIP hiPSC GSE56567.SOX2.hiPSC 160 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 115 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 213 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 190 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
STAT3 23 datasets
ChIP A139 GSE85579.STAT3.A139 172 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 144 bp overlap
ChIP HCC1937 GSE152203.STAT3.HCC1937 119 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 133 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 192 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 229 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 245 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 235 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 227 bp overlap
ChIP MCF-7_jc5842 GSE126004.STAT3.MCF-7_jc5842 195 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 197 bp overlap
ChIP MCF-7_jc5846 GSE126004.STAT3.MCF-7_jc5846 219 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 211 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 136 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 122 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 175 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 148 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 153 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 148 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 166 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 185 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 175 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 172 bp overlap
Six4 1 dataset
Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 286 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 100 bp overlap
TEAD4 7 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 230 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 345 bp overlap
ChIP H1 ENCFF778PAX 80 bp overlap
ChIP Ishikawa ENCFF772OTG 243 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 103 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 208 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 111 bp overlap
TFAP4 1 dataset
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 317 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 67 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 132 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 126 bp overlap
ChIP WTC11 ENCFF699QGS 417 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 169 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 58 bp overlap
YY1AP1 3 datasets
ChIP MCF-7_E2 GSE125594.YY1AP1.MCF-7_E2 128 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 125 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 145 bp overlap
ZNF143 3 datasets
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 192 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 153 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF379OSU 395 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF317 1 dataset
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF417 1 dataset
Motif DE_60h DE_60h-ZNF417_MA1727.2 7 bp overlap
ZNF675 1 dataset
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF766 1 dataset
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap