chr1 : 155,295,082 155,295,633
551 bp 81 TFs 1 linked gene
This 551 bp open chromatin element is linked to PKLR and is bound by 81 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PKLR 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:155,290,082 – 155,300,633
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AGO1 6 datasets
ChIP K-562 ENCSR641BSL.AGO1.K-562 551 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 536 bp overlap
ChIP K562 ENCFF025NLP 425 bp overlap
ChIP K562 ENCFF025NLP 551 bp overlap
ChIP K562 ENCFF741BCI 416 bp overlap
ChIP K562 ENCFF741BCI 551 bp overlap
AR 3 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 109 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 393 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 266 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 203 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 360 bp overlap
ChIP H1 ENCFF399KAM 360 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 551 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 274 bp overlap
BCL11A 4 datasets
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 62 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 70 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 106 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 98 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 364 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 551 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 551 bp overlap
BRD4 3 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 315 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 170 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 290 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 287 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 360 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 336 bp overlap
CTCF 5 datasets
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 327 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 262 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 149 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 220 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 226 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 325 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 69 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 183 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 85 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 133 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 241 bp overlap
ChIP T-HESCs GSE141063.EGR1.T-HESCs 178 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 356 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 81 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 259 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 261 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 234 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 214 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 225 bp overlap
EZH2 34 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 551 bp overlap
ChIP GM23248 ENCFF404ZHM 255 bp overlap
ChIP GM23248 ENCFF404ZHM 531 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 551 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 79 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 267 bp overlap
ChIP H1 ENCFF232NZA 457 bp overlap
ChIP H1 ENCFF232NZA 551 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 528 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 105 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 299 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 475 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 108 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 513 bp overlap
ChIP astrocyte ENCFF365JTP 326 bp overlap
ChIP astrocyte ENCFF365JTP 417 bp overlap
ChIP astrocyte ENCFF365JTP 358 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 202 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 166 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 481 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 407 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 551 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 83 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 327 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 258 bp overlap
ChIP fibroblast of lung ENCFF479BAW 214 bp overlap
ChIP fibroblast of lung ENCFF479BAW 453 bp overlap
ChIP fibroblast of lung ENCFF479BAW 105 bp overlap
ChIP hepatocyte ENCFF552DZB 551 bp overlap
ChIP keratinocyte ENCFF070STK 402 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 171 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 314 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 248 bp overlap
ChIP neural progenitor cell ENCFF472NFV 369 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 195 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 286 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 205 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 326 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 416 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 140 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 189 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 551 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 551 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 551 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 551 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 135 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 287 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 177 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 398 bp overlap
MAF1 1 dataset
ChIP THP-1_monocytes GSE96800.MAF1.THP-1_monocytes 153 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 91 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 388 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 267 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 153 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 269 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 551 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 177 bp overlap
NFKB1 3 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 514 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 182 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 266 bp overlap
NOTCH1 1 dataset
ChIP HCC1599 GSE116871.NOTCH1.HCC1599 178 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 551 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 515 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 409 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 458 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 551 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 268 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 551 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 456 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 371 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 341 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 551 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 316 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 343 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 551 bp overlap
RAD21 2 datasets
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 182 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 283 bp overlap
ChIP H1 ENCFF905HFL 283 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 551 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 551 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 551 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 188 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 140 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 164 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 402 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 441 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 305 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 551 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 551 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 335 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 551 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 75 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 167 bp overlap
SIN3A 7 datasets
ChIP H1 ENCFF042ZSL 302 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 242 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 259 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 136 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 161 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 155 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 436 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 368 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 151 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 551 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 551 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 201 bp overlap
SUZ12 6 datasets
ChIP H1 ENCFF881NFR 139 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 551 bp overlap
ChIP NT2/D1 ENCFF574SXS 551 bp overlap
ChIP NT2/D1 ENCFF574SXS 317 bp overlap
ChIP NT2/D1 ENCFF574SXS 85 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 397 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 184 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 246 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 103 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 551 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 229 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 529 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 413 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 211 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 174 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 551 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 543 bp overlap
ZFX 2 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 443 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 420 bp overlap
ZNF143 2 datasets
ChIP WA01 ENCSR000EBW.ZNF143.WA01 193 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 160 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 112 bp overlap