chr7 : 2,706,487 2,707,069
582 bp 81 TFs 5 linked genes
This 582 bp open chromatin element is linked to 5 target genes and is bound by 81 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
AMZ1 18.7 kb Distal Multiome
TTYH3 74.9 kb Distal Multiome
GNA12 137.4 kb Distal Multiome
IQCE 147.8 kb Distal Multiome
BRAT1 151.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:2,701,487 – 2,712,069
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 254 bp overlap
ChIP K562 ENCFF938UXQ 292 bp overlap
ATF2 5 datasets
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 232 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 338 bp overlap
ChIP HepG2 ENCFF955VER 96 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 378 bp overlap
ChIP K562 ENCFF139ZZG 391 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 560 bp overlap
ChIP K562 ENCFF604FPV 284 bp overlap
ATF7 2 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 532 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 262 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 214 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 144 bp overlap
BRD4 3 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 223 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 495 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 271 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 392 bp overlap
ChIP K562 ENCFF673OEZ 133 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 366 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 559 bp overlap
CREB1 5 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 294 bp overlap
ChIP MCF-7 ENCFF341ZEM 417 bp overlap
ChIP MCF-7 ENCFF867SAS 417 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 343 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 256 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 322 bp overlap
ChIP BLaER1 ENCFF335XTP 395 bp overlap
ChIP BLaER1 ENCFF364PUR 250 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 91 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 366 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 306 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 243 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol_45min_H4 GSE99626.ESR1.MCF-7_estradiol_45min_H4 128 bp overlap
FOXA1 3 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 158 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 109 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 200 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 452 bp overlap
ChIP DE DE-FOXA2-2 466 bp overlap
ChIP HepG2 ENCFF533COJ 243 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 254 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 227 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 315 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 163 bp overlap
GATA2 2 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 215 bp overlap
ChIP HepG2 ENCFF905PYM 252 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF352QVM 337 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 446 bp overlap
ChIP DE DE-GATA4-2 426 bp overlap
ChIP foregut GSE117136.GATA4.foregut 329 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 299 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 253 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 407 bp overlap
ChIP DE DE-GATA6-2 417 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 263 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 424 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 235 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 349 bp overlap
ChIP foregut GSE117136.GATA6.foregut 345 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 269 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 353 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 241 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 261 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 212 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 300 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 321 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 228 bp overlap
ChIP K562 ENCFF928TKZ 300 bp overlap
ChIP K562 ENCFF968WBH 387 bp overlap
HDAC2 6 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 346 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 113 bp overlap
ChIP K562 ENCFF744ALD 289 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 540 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 582 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 406 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 498 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 366 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 322 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 289 bp overlap
KDM1A 5 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 289 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 175 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 238 bp overlap
ChIP K562 ENCFF128TYE 287 bp overlap
ChIP K562 ENCFF133OLU 311 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 191 bp overlap
ChIP K562 ENCFF320EQC 371 bp overlap
MAX 1 dataset
ChIP K562 ENCFF398VJM 309 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 310 bp overlap
ChIP K562 ENCFF320GSD 381 bp overlap
MITF 1 dataset
ChIP K-562 ENCSR797SWM.MITF.K-562 149 bp overlap
MNT 2 datasets
ChIP K-562 ENCSR512NLO.MNT.K-562 124 bp overlap
ChIP K562 ENCFF450LDL 193 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 506 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 474 bp overlap
MYOD1 2 datasets
ChIP RH4 GSE83726.MYOD1.RH4 468 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 113 bp overlap
MYOG 3 datasets
ChIP RH4 GSE83726.MYOG.RH4 252 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 288 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 301 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 203 bp overlap
OSR2 2 datasets
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 208 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 358 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 380 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 309 bp overlap
ChIP K562 ENCFF286KMN 394 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 302 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 240 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 250 bp overlap
PKNOX1 7 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 292 bp overlap
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 311 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 415 bp overlap
ChIP K562 ENCFF236IUS 311 bp overlap
ChIP MCF-7 ENCFF116OCS 219 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 375 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 134 bp overlap
RAD21 2 datasets
ChIP RH4 GSE83726.RAD21.RH4 211 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 230 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 425 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 520 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 258 bp overlap
RELA 2 datasets
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 184 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 308 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 231 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 332 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 292 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 318 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 441 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 557 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 175 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 299 bp overlap
ChIP K562 ENCFF059YCJ 319 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 258 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 274 bp overlap
TFAP4 4 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 202 bp overlap
ChIP HepG2 ENCFF030SRU 248 bp overlap
ChIP HepG2 ENCFF932XOY 174 bp overlap
ChIP K562 ENCFF727PXG 401 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF265CEM 444 bp overlap
ChIP HEK293 ENCFF582MWI 404 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 95 bp overlap
USF2 1 dataset
ChIP K562 ENCFF397QGU 165 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 375 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 158 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 121 bp overlap
ZNF585B 2 datasets
ChIP HEK293 ENCFF657XIZ 278 bp overlap
ChIP HEK293 ENCSR011XCI.ZNF585B.HEK293 221 bp overlap
ZNF600 2 datasets
ChIP HEK293 ENCFF785JSX 163 bp overlap
ChIP HEK293 ENCFF785JSX 128 bp overlap
ZNF770 3 datasets
ChIP HEK293 GSE76494.ZNF770.HEK293 314 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 244 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 238 bp overlap