chr1 : 146,019,362 146,019,687
325 bp 85 TFs 0 linked genes
This 325 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:146,014,362 – 146,024,687
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 254 bp overlap
ARNT 1 dataset
ChIP 501-mel GSE95280.ARNT.501-mel 219 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 213 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 289 bp overlap
ChIP H1 ENCFF399KAM 325 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 325 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 322 bp overlap
BCL11A 1 dataset
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 76 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 325 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 325 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 325 bp overlap
BRD2 1 dataset
ChIP HUVEC-C GSE60171.BRD2.HUVEC-C 86 bp overlap
BRD4 4 datasets
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 259 bp overlap
ChIP hESC GSE33281.BRD4.hESC 183 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 161 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 252 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 325 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 279 bp overlap
CTCF 14 datasets
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 95 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 146 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 312 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 142 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 222 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 244 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 253 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 177 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 121 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 226 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 168 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 244 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 114 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 281 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 325 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 200 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 313 bp overlap
ESR1 7 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 290 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 287 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 294 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 325 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 261 bp overlap
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 80 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 214 bp overlap
EZH2 17 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 185 bp overlap
ChIP GM23338 ENCFF613YON 190 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 185 bp overlap
ChIP H1 ENCFF232NZA 154 bp overlap
ChIP H1 ENCFF232NZA 325 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 325 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 198 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 52 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 325 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 63 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 325 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 325 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 156 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 218 bp overlap
ChIP keratinocyte ENCFF070STK 192 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 143 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 319 bp overlap
EZH2_phosphoT487 4 datasets
ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 75 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 133 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 97 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 192 bp overlap
FLI1 2 datasets
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 209 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 167 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 322 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 125 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 205 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 306 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 183 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 187 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 180 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 86 bp overlap
JUN 1 dataset
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 210 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 96 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 325 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 325 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 325 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 66 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 275 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 200 bp overlap
KDM5B 1 dataset
ChIP MCF-7 GSE46055.KDM5B.MCF-7 130 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 243 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 211 bp overlap
ChIP WTC11 ENCFF223QFY 325 bp overlap
MED1 2 datasets
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 79 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 218 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 277 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 52 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 258 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 294 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 307 bp overlap
NANOG 3 datasets
ChIP WA01 ERP004238.NANOG.WA01 283 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 175 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 295 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 325 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 218 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 247 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 325 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 314 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 325 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 325 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 325 bp overlap
PHF8 2 datasets
ChIP WA01 ENCSR000ATK.PHF8.WA01 62 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 150 bp overlap
POLR2A 4 datasets
ChIP H1 ENCFF566JSR 325 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 325 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 245 bp overlap
ChIP right lobe of liver ENCFF026NCK 325 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 146 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 325 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 59 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 106 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 325 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 307 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 325 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 228 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 193 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 195 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 148 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 188 bp overlap
ChIP liver ENCFF522JHE 325 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 325 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 325 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 197 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 183 bp overlap
RNF2 4 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 216 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 235 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 229 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 325 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 325 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 325 bp overlap
RUNX1 3 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 63 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 63 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 126 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 325 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 325 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 217 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 105 bp overlap
SMARCA4 1 dataset
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 220 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 200 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 204 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 227 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 197 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 325 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 317 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 291 bp overlap
SUZ12 6 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 325 bp overlap
ChIP GM12878 ENCFF498QAM 266 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 142 bp overlap
ChIP H1 ENCFF881NFR 325 bp overlap
ChIP H1 ENCFF881NFR 325 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 265 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 227 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 232 bp overlap
TBP 8 datasets
ChIP H1 ENCFF859IIO 325 bp overlap
ChIP H1 ENCFF859IIO 131 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 227 bp overlap
ChIP hESC GSE122298.TBP.hESC 193 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 232 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 98 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 127 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 175 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 272 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 168 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 325 bp overlap
TP53 3 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 228 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 216 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 172 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 220 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 266 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 269 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 178 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 325 bp overlap
YY1 2 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 233 bp overlap
ChIP liver ENCFF400MBC 325 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 325 bp overlap
ChIP K562 ENCFF875HLX 325 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 273 bp overlap
ZNF263 1 dataset
ChIP WTC11 ENCFF893RTM 261 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap