chr6 : 90,288,516 – 90,288,740
224 bp 64 TFs 1 linked gene
This 224 bp open chromatin element is linked to ENSG00000260271 and is bound by 64 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000260271 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:90,283,516 – 90,293,740
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
ATF3 4 datasets
ChIP liver ENCFF375GID 224 bp overlap
ChIP liver ENCFF867MFZ 224 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 224 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 173 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 161 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 192 bp overlap
BACH2 5 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 224 bp overlap
ChIP B-cell_siBACH2 GSE102460.BACH2.B-cell_siBACH2 160 bp overlap
ChIP DOHH2 GSE69558.BACH2.DOHH2 224 bp overlap
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 224 bp overlap
ChIP OCI-Ly7 GSE69558.BACH2.OCI-Ly7 224 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 194 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 165 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 143 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 148 bp overlap
BRD4 6 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 90 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 202 bp overlap
ChIP Mutu-1_JQ1 GSE84213.BRD4.Mutu-1_JQ1 200 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 224 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 224 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 126 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 207 bp overlap
CEBPA 7 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 224 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 216 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 224 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 210 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 224 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 224 bp overlap
ChIP liver ERP002306.CEBPA.liver 224 bp overlap
CEBPB 4 datasets
ChIP H1 ENCFF871PTR 224 bp overlap
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 101 bp overlap
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 202 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 213 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 152 bp overlap
CTCF 1 dataset
ChIP hepatocyte ERP000395.CTCF.hepatocyte 186 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 152 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 160 bp overlap
EGR1 2 datasets
ChIP liver ENCFF130MBW 224 bp overlap
ChIP liver ENCSR736BUG.EGR1.liver 169 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 224 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 189 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 224 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 217 bp overlap
FOXA1 3 datasets
ChIP liver ENCFF749ERP 224 bp overlap
ChIP liver ERP002306.FOXA1.liver 194 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 144 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 224 bp overlap
ChIP DE DE-FOXA2-2 224 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 182 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 176 bp overlap
GATA2 7 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 205 bp overlap
ChIP SH-SY5Y ENCFF485YIB 224 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 224 bp overlap
ChIP SK-N-SH ENCFF764OZD 224 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 140 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 111 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 215 bp overlap
GATA3 3 datasets
ChIP Kelly GSE65664.GATA3.Kelly 221 bp overlap
ChIP SH-SY5Y ENCFF475HYF 224 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 216 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 224 bp overlap
ChIP DE DE-GATA4-2 224 bp overlap
ChIP foregut GSE117136.GATA4.foregut 224 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 224 bp overlap
ChIP DE DE-GATA6-2 224 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 185 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 224 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 224 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 185 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 224 bp overlap
ChIP foregut GSE117136.GATA6.foregut 224 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 224 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 224 bp overlap
ChIP liver ENCFF449HPV 217 bp overlap
ChIP liver ERP002306.HNF4A.liver 224 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 191 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 161 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 193 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 224 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 224 bp overlap
JUND 5 datasets
ChIP liver ENCFF007WWT 224 bp overlap
ChIP liver ENCFF007WWT 123 bp overlap
ChIP liver ENCFF557PGE 224 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 224 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 214 bp overlap
KMT2A 2 datasets
ChIP L826 GSE83671.KMT2A.L826 121 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 224 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 224 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 133 bp overlap
MAFF 5 datasets
ChIP HeLa-S3 ENCFF783SBT 164 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 130 bp overlap
ChIP HepG2 ENCFF452YUT 100 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 138 bp overlap
ChIP K562 ENCFF071YKK 161 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 224 bp overlap
ChIP K562 ENCFF455EEO 163 bp overlap
MAFK 14 datasets
ChIP A549 ENCFF371EPR 157 bp overlap
ChIP GM12878 ENCFF605LFT 139 bp overlap
ChIP H1 ENCFF854XWE 141 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 114 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 114 bp overlap
ChIP HepG2 ENCFF743ZOF 106 bp overlap
ChIP HepG2 ENCFF767LDG 153 bp overlap
ChIP IMR-90 ENCFF336DHZ 138 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 139 bp overlap
ChIP K562 ENCFF380WHM 170 bp overlap
ChIP MCF-7 ENCFF558JLG 90 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 224 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 224 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 191 bp overlap
MAX 3 datasets
ChIP liver ENCFF584QGB 224 bp overlap
ChIP liver ENCFF584QGB 121 bp overlap
ChIP liver ENCSR521IID.MAX.liver 224 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 224 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 160 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 224 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 160 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 202 bp overlap
NCOR1 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 163 bp overlap
NCOR2 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 174 bp overlap
ChIP OCI-Ly1 GSE29282.NCOR2.OCI-Ly1 168 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 150 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 161 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 105 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR168SMX.NR2F2.liver 193 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 167 bp overlap
ONECUT1 1 dataset
ChIP liver ERP002306.ONECUT1.liver 123 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 221 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 208 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 191 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 224 bp overlap
ChIP liver ENCFF522JHE 224 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 217 bp overlap
REST 2 datasets
ChIP liver ENCFF240FWT 224 bp overlap
ChIP liver ENCSR867WPH.REST.liver 208 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 224 bp overlap
ChIP liver ENCFF807CIA 224 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 224 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 224 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 224 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 211 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 224 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 224 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 224 bp overlap
ChIP liver ENCFF769YSM 224 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 224 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 206 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 135 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 175 bp overlap
YY1 2 datasets
ChIP liver ENCFF400MBC 181 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 224 bp overlap
ZBTB33 1 dataset
ChIP liver ENCSR516HUP.ZBTB33.liver 224 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 224 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 209 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 144 bp overlap
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