chr6 : 57,224,951 57,225,409
458 bp 62 TFs 1 linked gene
This 458 bp open chromatin element is linked to RAB23 and is bound by 62 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RAB23 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:57,219,951 – 57,230,409
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 301 bp overlap
ChIP K562 ENCFF938UXQ 403 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 175 bp overlap
ChIP K562 ENCFF921JQW 354 bp overlap
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 128 bp overlap
CDK8 13 datasets
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 458 bp overlap
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 146 bp overlap
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 70 bp overlap
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 58 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 180 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 118 bp overlap
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 147 bp overlap
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 98 bp overlap
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 66 bp overlap
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 108 bp overlap
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 92 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 57 bp overlap
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 62 bp overlap
CEBPB 11 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 156 bp overlap
ChIP HeLa-S3 ENCFF722WEG 163 bp overlap
ChIP IMR-90 ENCFF468UGY 105 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 109 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 119 bp overlap
ChIP K562 ENCFF189VBN 168 bp overlap
ChIP K562 ENCFF194QGF 198 bp overlap
ChIP K562 ENCFF584CTB 320 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 85 bp overlap
ChIP hMSC GSE68864.CEBPB.hMSC 172 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.CEBPB.monocyte_MACROPHAGE 127 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 160 bp overlap
ChIP K562 ENCFF403WPG 272 bp overlap
CTCF 1 dataset
ChIP AG10803 ENCFF549AQK 145 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 164 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 111 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 257 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 226 bp overlap
FOS 6 datasets
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 56 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 99 bp overlap
ChIP leiomyoma_PT967 GSE128230.FOS.leiomyoma_PT967 68 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 78 bp overlap
ChIP myometrium_PT916 GSE128230.FOS.myometrium_PT916 52 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 61 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 249 bp overlap
ChIP K562 ENCFF455MKD 400 bp overlap
FOSL2 2 datasets
ChIP SK-N-SH ENCFF127ZDW 201 bp overlap
ChIP SK-N-SH ENCFF127ZDW 285 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 235 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 200 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 76 bp overlap
GATA2 9 datasets
ChIP ESF GSE108408.GATA2.ESF 236 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 205 bp overlap
ChIP K562 ENCFF830LLA 80 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 198 bp overlap
ChIP dermal-fibroblast GSE51025.GATA2.dermal-fibroblast 97 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 123 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 312 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 368 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 221 bp overlap
GATA3 3 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 267 bp overlap
ChIP MCF-7 ENCFF352QVM 229 bp overlap
ChIP SK-N-SH ENCFF040SSB 83 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 458 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 458 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 426 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 458 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 458 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF679VBB 170 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 192 bp overlap
ChIP K562 ENCFF968WBH 291 bp overlap
HNRNPK 1 dataset
ChIP HepG2 ENCFF493GNS 99 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 256 bp overlap
ChIP K562 ENCFF348IBL 239 bp overlap
ChIP K562 ENCFF771OHZ 134 bp overlap
JUN 4 datasets
ChIP leiomyoma_PT1063 GSE128230.JUN.leiomyoma_PT1063 57 bp overlap
ChIP leiomyoma_PT848 GSE128230.JUN.leiomyoma_PT848 51 bp overlap
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 51 bp overlap
ChIP myometrium_PT886 GSE128230.JUN.myometrium_PT886 70 bp overlap
JUND 3 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 151 bp overlap
ChIP K562 ENCFF336RCR 258 bp overlap
ChIP K562 ENCFF830LVJ 184 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 176 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 95 bp overlap
MAZ 2 datasets
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 101 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 101 bp overlap
MED1 9 datasets
ChIP SGBS GSE64233.MED1.SGBS 200 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 201 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 157 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 159 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 202 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 122 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 88 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 93 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 122 bp overlap
MED12 13 datasets
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 154 bp overlap
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 99 bp overlap
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 56 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 150 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 129 bp overlap
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 104 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 169 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 103 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 58 bp overlap
ChIP myometrium_PT848 GSE128230.MED12.myometrium_PT848 60 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 178 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 149 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 60 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 458 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 258 bp overlap
ChIP K562 ENCFF320GSD 208 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 189 bp overlap
MYB 5 datasets
ChIP DU528 GSE94000.MYB.DU528 226 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 313 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 432 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 191 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 256 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 319 bp overlap
ChIP K562 ENCFF286KMN 334 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 318 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 458 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 356 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF066JWO 383 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 161 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 105 bp overlap
REST 1 dataset
ChIP K562 ENCFF685YZN 200 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 92 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 135 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 71 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 376 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 381 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 198 bp overlap
ChIP K562 ENCFF690CFF 272 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 221 bp overlap
ChIP K562 ENCFF059YCJ 248 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 341 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 186 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 175 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 163 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 191 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 351 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 121 bp overlap
USF2 1 dataset
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 117 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 321 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 186 bp overlap
ZNF239 4 datasets
ChIP HEK293 ENCFF850XGU 279 bp overlap
ChIP HEK293 ENCSR440COG.ZNF239.HEK293 259 bp overlap
ChIP K-562 ENCSR606KTL.ZNF239.K-562 315 bp overlap
ChIP K562 ENCFF703IKI 242 bp overlap