chr1 : 107,432,115 107,432,481
366 bp 87 TFs 0 linked genes
This 366 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:107,427,115 – 107,437,481
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 137 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 366 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 226 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 226 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 224 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 335 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 366 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 219 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 366 bp overlap
ChIP H1 ENCFF126NLU 277 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 141 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 366 bp overlap
ChIP GM12878 ENCFF681AJV 287 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 362 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCFF692SMY 366 bp overlap
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 227 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 275 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF242HCG 282 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 308 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 113 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 309 bp overlap
FLI1 3 datasets
ChIP A-673 GSE99959.FLI1.A-673 220 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 271 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 306 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 366 bp overlap
ChIP DE DE-FOXA2-2 366 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 341 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 223 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 337 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 186 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 333 bp overlap
ChIP DE DE-GATA4-2 324 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 308 bp overlap
ChIP DE DE-GATA6-2 279 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 258 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 366 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 366 bp overlap
ChIP GM12878 ENCFF824TGK 366 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 366 bp overlap
ChIP GM12878 ENCFF918AID 366 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 362 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 366 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 345 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 317 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 366 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 366 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 201 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 366 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 366 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 263 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 366 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 366 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 366 bp overlap
ChIP hESC GSE20650.NANOG.hESC 265 bp overlap
ChIP hESC GSE18292.NANOG.hESC 230 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 366 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 234 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 366 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 366 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 366 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 366 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 324 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 366 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 248 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 68 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 267 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 239 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 366 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 365 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 187 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 116 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 366 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 215 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 169 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 207 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
ChIP LCL GSE75503.RBPJ.LCL 229 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 366 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 361 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 151 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 303 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 215 bp overlap
SKIL 3 datasets
ChIP GM12878 ENCFF171OVM 366 bp overlap
ChIP GM12878 ENCFF171OVM 323 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 350 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 273 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 355 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 355 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 228 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 6 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 366 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 319 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 302 bp overlap
ChIP WA09 GSE105028.SMARCA4.WA09 242 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 295 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 359 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 325 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 366 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 259 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 366 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 305 bp overlap
SOX2 2 datasets
ChIP hESC GSE69479.SOX2.hESC 190 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 337 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 148 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 222 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 366 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 358 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 363 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 351 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 185 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 194 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 249 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 318 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 284 bp overlap
ZNF140 1 dataset
ChIP HEK293 GSE76494.ZNF140.HEK293 91 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 300 bp overlap
ZNF217 2 datasets
ChIP GM12878 ENCFF978IGL 366 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 339 bp overlap
ZNF24 2 datasets
ChIP GM12878 ENCFF688STO 338 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 218 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 247 bp overlap
ZNF585B 2 datasets
ChIP HEK293 ENCFF657XIZ 122 bp overlap
ChIP HEK293 ENCSR011XCI.ZNF585B.HEK293 224 bp overlap