chr6 : 12,594,301 – 12,594,680
379 bp 70 TFs 0 linked genes
This 379 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:12,589,301 – 12,599,680
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ATF1 2 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 296 bp overlap
ChIP K562 ENCFF817JQF 379 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCFF521LQJ 173 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 61 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 81 bp overlap
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 69 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 209 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 379 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 112 bp overlap
BRD3 2 datasets
ChIP LPS141 GSE111253.BRD3.LPS141 122 bp overlap
ChIP LPS141 GSE111253.BRD3.LPS141 205 bp overlap
BRD4 6 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 58 bp overlap
ChIP HEK293_sgMYOD GSE129407.BRD4.HEK293_sgMYOD 259 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 379 bp overlap
ChIP SEM GSE83671.BRD4.SEM 87 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 266 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 379 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 165 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 53 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 58 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 101 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 349 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 228 bp overlap
ChIP K562 ENCFF403WPG 311 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 124 bp overlap
ChIP BLaER1 ENCFF335XTP 216 bp overlap
ChIP BLaER1 ENCFF460KDD 247 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 164 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 281 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 156 bp overlap
EGR1 5 datasets
ChIP GM12878 ENCFF092DJY 119 bp overlap
ChIP GM12878 ENCSR000BMQ.EGR1.GM12878 75 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 379 bp overlap
ChIP HepG2 ENCFF674RQO 339 bp overlap
ChIP HepG2 ENCFF674RQO 328 bp overlap
ELF3 4 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 96 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 84 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 164 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 120 bp overlap
ESR1 2 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 151 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 101 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 379 bp overlap
ChIP K562 ENCFF968PEP 379 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 232 bp overlap
FOXA1 5 datasets
ChIP PDAC GSE64557.FOXA1.PDAC 140 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 317 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 115 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 92 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 96 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 339 bp overlap
ChIP DE DE-FOXA2-2 283 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 232 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 274 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 272 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 193 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 287 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 311 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 379 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 226 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 278 bp overlap
ChIP foregut GSE117136.GATA6.foregut 364 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 298 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 379 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 223 bp overlap
HNF1A 2 datasets
ChIP HepG2 ENCFF540TRC 379 bp overlap
ChIP HepG2 ENCFF540TRC 318 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF824TGK 326 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 298 bp overlap
ChIP K562 ENCFF348IBL 67 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 277 bp overlap
ChIP GM12878 ENCFF918AID 183 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 184 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 142 bp overlap
IRF1 3 datasets
ChIP K-562 ENCSR854MCV.IRF1.K-562 379 bp overlap
ChIP K562 ENCFF277KTJ 332 bp overlap
ChIP K562 ENCFF277KTJ 131 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 313 bp overlap
MAX 3 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 108 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 136 bp overlap
ChIP HepG2 ENCFF507HCX 379 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 99 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 235 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 56 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 151 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 379 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 190 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 204 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 345 bp overlap
MYB 1 dataset
ChIP SEM GSE117864.MYB.SEM 103 bp overlap
MYC 3 datasets
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 168 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 108 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 362 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 212 bp overlap
NR2C1 3 datasets
ChIP K-562 ENCSR742IDN.NR2C1.K-562 305 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 285 bp overlap
ChIP K562 ENCFF239KMA 333 bp overlap
NR2C2 2 datasets
ChIP K-562 ENCSR750LYM.NR2C2.K-562 364 bp overlap
ChIP K562 ENCFF750AXF 379 bp overlap
NR2F1 3 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 379 bp overlap
ChIP K562 ENCFF221HJH 247 bp overlap
ChIP K562 ENCFF221HJH 226 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 175 bp overlap
ChIP K562 ENCFF674RQA 379 bp overlap
NRF1 16 datasets
ChIP HCC1954 GSE67867.NRF1.HCC1954 211 bp overlap
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 200 bp overlap
ChIP Hep-G2 GSE97661.NRF1.Hep-G2 172 bp overlap
ChIP HepG2 ENCFF694NVY 220 bp overlap
ChIP HepG2 ENCFF942ICJ 330 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 379 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 379 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 181 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 202 bp overlap
ChIP K-562_Ab_R157-1-3H1 GSE97661.NRF1.K-562_Ab_R157-1-3H1 122 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 133 bp overlap
ChIP K562 ENCFF130SGK 145 bp overlap
ChIP K562 ENCFF689EWI 379 bp overlap
ChIP K562 ENCFF689EWI 379 bp overlap
ChIP K562 ENCFF791UHF 362 bp overlap
ChIP K562 ENCFF791UHF 367 bp overlap
PKNOX1 1 dataset
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 205 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 87 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 379 bp overlap
POLR2A 2 datasets
ChIP upper lobe of left lung ENCFF199JUI 237 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 305 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 145 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 214 bp overlap
RELA 4 datasets
ChIP 786-O GSE86092.RELA.786-O 151 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 129 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 258 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 186 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH ENCFF449PID 337 bp overlap
SOX6 4 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 379 bp overlap
ChIP HepG2 ENCFF767OCK 367 bp overlap
ChIP K-562 ENCSR788RSW.SOX6.K-562 262 bp overlap
ChIP K562 ENCFF059YCJ 293 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 227 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 86 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 106 bp overlap
STAT3 1 dataset
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 107 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 117 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 90 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 128 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 262 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 350 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 235 bp overlap
ChIP K562 ENCFF975RXS 258 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 346 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 379 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 370 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF267NLX 349 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 322 bp overlap
ZNF83 1 dataset
ChIP K562 ENCFF340RTV 379 bp overlap
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