chr5 : 170,761,207 – 170,762,213
1,006 bp 72 TFs 4 linked genes
This 1.0 kb open chromatin element is linked to 4 target genes and is bound by 72 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GABRP 2.7 kb Proximal Proximity
ENSG00000253348 5.3 kb Proximal Proximity
RANBP17 100.4 kb Distal Multiome
KCNIP1 257.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:170,756,207 – 170,767,213
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 986 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 736 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 122 bp overlap
BCOR 3 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 177 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 430 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 241 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 356 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 810 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 819 bp overlap
BRD3 3 datasets
ChIP H-1 GSE126661.BRD3.H-1 282 bp overlap
ChIP H-1 GSE126661.BRD3.H-1 348 bp overlap
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 219 bp overlap
BRD4 2 datasets
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 79 bp overlap
ChIP hESC GSE33281.BRD4.hESC 144 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 590 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 527 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 170 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 63 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 164 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 181 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 481 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 422 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 244 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 560 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 317 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 685 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 362 bp overlap
ChIP hESC GSE17917.EP300.hESC 465 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 377 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 529 bp overlap
GTF2F1 1 dataset
ChIP H1 ENCFF399TGL 345 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 151 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 334 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 190 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 190 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 470 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 437 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 466 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 707 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 883 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 837 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 615 bp overlap
JUND 2 datasets
ChIP WA01 ENCSR000BKP.JUND.WA01 322 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 113 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 285 bp overlap
KLF4 4 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 145 bp overlap
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 112 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 336 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 812 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 537 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 120 bp overlap
ChIP GM23338 ENCFF065NZG 78 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 450 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 1006 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 873 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 198 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 618 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 922 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 451 bp overlap
ChIP hESC GSE20650.NANOG.hESC 271 bp overlap
ChIP hESC GSE18292.NANOG.hESC 227 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 736 bp overlap
NFATC2 1 dataset
ChIP CD4 GSE116695.NFATC2.CD4 242 bp overlap
NIPBL 1 dataset
ChIP hESC GSE64758.NIPBL.hESC 289 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 357 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 465 bp overlap
ChIP GM23338 ENCFF450WCS 155 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
POU5F1 11 datasets
ChIP BG03 GSE21614.POU5F1.BG03 267 bp overlap
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 130 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 914 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 193 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 283 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 361 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 690 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 766 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 386 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 389 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 150 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 203 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 645 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 634 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 582 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 286 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 682 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 713 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 573 bp overlap
ChIP hESC GSE75297.SMAD3.hESC 304 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 266 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 549 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 683 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 335 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 867 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 128 bp overlap
SOX2 3 datasets
ChIP hESC GSE69479.SOX2.hESC 273 bp overlap
ChIP hESC GSE18292.SOX2.hESC 188 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 603 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 293 bp overlap
SP4 2 datasets
ChIP WA01 ENCSR000BQV.SP4.WA01 152 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 159 bp overlap
SPI1 2 datasets
ChIP KG-1 GSE128834.SPI1.KG-1 162 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 103 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 133 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 185 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 429 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 118 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 212 bp overlap
TBP 6 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 219 bp overlap
ChIP hESC GSE122298.TBP.hESC 570 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 213 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 670 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 132 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 167 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 371 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 772 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 489 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 293 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 334 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 379 bp overlap
TP53 5 datasets
ChIP H9 GSE142050.TP53.H9 392 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 380 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 307 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 378 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 374 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 234 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 301 bp overlap
USF2 2 datasets
ChIP H1 ENCFF434EDF 277 bp overlap
ChIP WTC11 ENCFF139JAW 417 bp overlap
YY1 2 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 285 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 225 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 401 bp overlap
ZNF114 2 datasets
ChIP GM23338 ENCFF631OSW 213 bp overlap
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 460 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 244 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 180 bp overlap
ZNF671 2 datasets
ChIP WTC11 ENCFF053HBV 265 bp overlap
ChIP WTC11 ENCFF053HBV 265 bp overlap
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