chr4 : 164,136,333 164,136,743
410 bp 108 TFs 0 linked genes
This 410 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:164,131,333 – 164,141,743
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
AR 1 dataset
ChIP A-375 GSE116189.AR.A-375 220 bp overlap
ARID1A 2 datasets
ChIP NGP GSE134626.ARID1A.NGP 173 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 253 bp overlap
ATF3 3 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 75 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 259 bp overlap
ChIP K562 ENCFF921JQW 352 bp overlap
ATF4 5 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 131 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 108 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 238 bp overlap
ChIP K562 ENCFF030XBX 108 bp overlap
ChIP K562 ENCFF674KTF 156 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BATF 1 dataset
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 122 bp overlap
BCL6 2 datasets
ChIP K-562 ENCSR802AHH.BCL6.K-562 124 bp overlap
ChIP K562 ENCFF501MST 242 bp overlap
BRD2 5 datasets
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 230 bp overlap
ChIP K-562 GSE140325.BRD2.K-562 138 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 393 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 229 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 410 bp overlap
BRD3 1 dataset
ChIP MM1-S GSE43743.BRD3.MM1-S 283 bp overlap
BRD4 14 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 410 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 410 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 185 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 185 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 349 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 139 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 206 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 89 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 269 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 121 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 367 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 185 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 410 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 98 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 91 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 151 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 286 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 216 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 174 bp overlap
CEBPB 5 datasets
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 120 bp overlap
ChIP HCT116 ENCFF097OLY 211 bp overlap
ChIP HL-60 GSE107553.CEBPB.HL-60 110 bp overlap
ChIP HeLa-S3 ENCFF722WEG 159 bp overlap
ChIP hMSC GSE68864.CEBPB.hMSC 115 bp overlap
CEBPG 4 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 244 bp overlap
ChIP K-562 ENCSR490LWA.CEBPG.K-562 278 bp overlap
ChIP K562 ENCFF783ADE 155 bp overlap
ChIP K562 ENCFF956TPS 74 bp overlap
CTCF 5 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 291 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 102 bp overlap
ChIP chondrocyte ENCFF134ORZ 312 bp overlap
ChIP osteocyte ENCFF929FPD 250 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 219 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 346 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 262 bp overlap
ChIP BLaER1 ENCFF274GAT 265 bp overlap
ChIP BLaER1 ENCFF364PUR 405 bp overlap
ChIP BLaER1 ENCFF896HSY 228 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 260 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 230 bp overlap
EP300 3 datasets
ChIP HeLa-S3 ENCFF089VPQ 190 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 178 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 77 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 137 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 321 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 196 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 247 bp overlap
EZH1 1 dataset
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 100 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 65 bp overlap
Foxn1 1 dataset
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 268 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 192 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 56 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
ChIP K-562 GSE121208.HOXB8.K-562 137 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
IRF4 3 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 82 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 82 bp overlap
ChIP U266 GSE142493.IRF4.U266 331 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 283 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 279 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 173 bp overlap
MED1 9 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 308 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 285 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 405 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 265 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 123 bp overlap
ChIP hMSC-TERT4_D0 GSE104537.MED1.hMSC-TERT4_D0 132 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 191 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 202 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 196 bp overlap
MEF2B 1 dataset
ChIP DLBCL GSE110682.MEF2B.DLBCL 121 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 214 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 255 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 410 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 237 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 91 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 155 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF508RDJ 410 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 93 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 75 bp overlap
Pax7 1 dataset
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 348 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 147 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR076YPO.RNF2.K-562 99 bp overlap
RUNX1 3 datasets
ChIP Jurkat GSE76181.RUNX1.Jurkat 171 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 171 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 128 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 88 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 277 bp overlap
SMARCA4 2 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 374 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 410 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 246 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 181 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 73 bp overlap
TBP 2 datasets
ChIP HeLa-S3 ENCFF715NNJ 186 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 217 bp overlap
TEAD1 1 dataset
ChIP K-562 ENCSR591ASD.TEAD1.K-562 232 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 153 bp overlap
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 275 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 145 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZFX 1 dataset
ChIP K-562 ENCSR920ASP.ZFX.K-562 292 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF175 1 dataset
ChIP K562 ENCFF497AEJ 407 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZSCAN32 1 dataset
ChIP K562 ENCFF960API 174 bp overlap