chr4 : 128,644,695 – 128,645,035
340 bp 91 TFs 1 linked gene
This 340 bp open chromatin element is linked to ENSG00000289243 and is bound by 91 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289243 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:128,639,695 – 128,650,035
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ADNP 2 datasets
ChIP K562 ENCFF492SKF 276 bp overlap
ChIP K562 ENCFF492SKF 69 bp overlap
ARID2 1 dataset
ChIP K562 ENCFF099BVK 312 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 253 bp overlap
Atoh1 1 dataset
Motif DE_48h DE_48h-Atoh1_MA1467.3 7 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 185 bp overlap
CTCF 17 datasets
ChIP D721Med ENCFF513FYD 211 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 329 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP K562 ENCFF400DFR 241 bp overlap
ChIP K562 ENCFF430KTH 326 bp overlap
ChIP K562 ENCFF430KTH 94 bp overlap
ChIP K562 ENCFF598YSU 271 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP body of pancreas ENCFF269EDN 267 bp overlap
ChIP body of pancreas ENCFF438KTE 124 bp overlap
ChIP body of pancreas ENCFF798MEO 155 bp overlap
ChIP body of pancreas ENCFF881RGF 174 bp overlap
ChIP endodermal cell ENCFF471YCZ 228 bp overlap
ChIP transverse colon ENCFF471AZS 338 bp overlap
Crx 2 datasets
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
Dmbx1 2 datasets
Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 310 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 221 bp overlap
ESR2 1 dataset
Motif DE_48h DE_48h-ESR2_MA0258.2 15 bp overlap
FEZF2 1 dataset
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 232 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 340 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 340 bp overlap
ChIP DE DE-GATA4-2 340 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 317 bp overlap
ChIP DE DE-GATA6-2 340 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 327 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 332 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 306 bp overlap
GSC 2 datasets
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF919OMP 143 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 340 bp overlap
HOXA10 2 datasets
Motif DE_48h DE_48h-HOXA10_MA0899.2 9 bp overlap
Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap
HOXD9 2 datasets
Motif DE_48h DE_48h-HOXD9_MA0913.3 9 bp overlap
Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap
Hand1::Tcf3 1 dataset
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
Hnf1A 2 datasets
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
Motif DE_60h DE_60h-IRF4_MA1419.2 14 bp overlap
IRF8 1 dataset
Motif DE_60h DE_60h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_60h DE_60h-IRF9_MA0653.1 15 bp overlap
Irf1 1 dataset
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
KLF4 2 datasets
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 132 bp overlap
MAZ 5 datasets
Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap
Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
ChIP K562 ENCFF333ZIV 229 bp overlap
ChIP K562 ENCFF809XHP 340 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MLLT1 1 dataset
ChIP K562 ENCFF871DSA 306 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 113 bp overlap
MTA1 1 dataset
ChIP K562 ENCFF230ZKA 340 bp overlap
NEUROG2 1 dataset
Motif DE_48h DE_48h-NEUROG2_MA1642.2 7 bp overlap
NR2C1 2 datasets
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
ChIP K562 ENCFF239KMA 56 bp overlap
NR2C2 2 datasets
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
NR2F1 2 datasets
Motif DE_48h DE_48h-NR2F1_MA0017.3 12 bp overlap
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 72 bp overlap
Nr1H2 1 dataset
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Nr2f6 1 dataset
Motif DE_48h DE_48h-Nr2f6_MA0677.2 13 bp overlap
OTX1 2 datasets
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PATZ1 1 dataset
Motif DE_48h DE_48h-PATZ1_MA1961.2 11 bp overlap
PITX1 2 datasets
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PPARA::RXRA 1 dataset
Motif DE_48h DE_48h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 1 dataset
Motif DE_48h DE_48h-PPARD_MA1550.2 14 bp overlap
PRDM9 2 datasets
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 1 dataset
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
RAD21 5 datasets
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP K562 ENCFF066JWO 151 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 216 bp overlap
RB1 1 dataset
ChIP K562 ENCFF627ZBG 323 bp overlap
REST 1 dataset
ChIP K562 ENCFF688UKW 293 bp overlap
RHOXF1 2 datasets
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RXRB 1 dataset
Motif DE_48h DE_48h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_48h DE_48h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_48h DE_48h-Rxra_MA0512.2 14 bp overlap
SKIL 2 datasets
ChIP K562 ENCFF560QSF 340 bp overlap
ChIP K562 ENCFF560QSF 162 bp overlap
SMAD2 1 dataset
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 258 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 288 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 338 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 340 bp overlap
SMC3 1 dataset
ChIP K562 ENCFF582XIX 265 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 264 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
SP1 2 datasets
Motif DE_48h DE_48h-SP1_MA0079.5 9 bp overlap
Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap
SP4 2 datasets
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 301 bp overlap
TAF7 1 dataset
ChIP K562 ENCFF314WLE 213 bp overlap
TBX1 1 dataset
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap
Tbx6 1 dataset
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Wt1 2 datasets
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZBTB32 1 dataset
Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap
ZBTB40 1 dataset
ChIP K562 ENCFF521DSV 340 bp overlap
ZEB1 1 dataset
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF795CMH 198 bp overlap
ZKSCAN5 3 datasets
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF148 3 datasets
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF184 3 datasets
ChIP K562 ENCFF579ZRD 228 bp overlap
ChIP K562 ENCFF717TPQ 297 bp overlap
ChIP K562 ENCFF717TPQ 96 bp overlap
ZNF213 1 dataset
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
ZNF410 2 datasets
Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap
Motif DE_72h DE_72h-ZNF410_MA0752.2 16 bp overlap
ZNF701 3 datasets
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap
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