chr4 : 114,494,348 114,494,560
212 bp 104 TFs 0 linked genes
This 212 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:114,489,348 – 114,499,560
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 212 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 133 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 208 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 138 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 205 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 114 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 212 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 131 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 212 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 212 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 212 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 126 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 212 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
EN2 1 dataset
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 197 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 180 bp overlap
ChIP hESC GSE17917.EP300.hESC 212 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 212 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 109 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 198 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 182 bp overlap
FOXC2 1 dataset
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 193 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 146 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 212 bp overlap
GBX1 1 dataset
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 212 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 159 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 108 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 212 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 212 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 212 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 212 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 212 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 212 bp overlap
JUND 1 dataset
ChIP H1 ENCFF468JZD 161 bp overlap
KLF1 1 dataset
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 135 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 212 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
LBX1 1 dataset
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 198 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 173 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 204 bp overlap
ChIP H1 ENCFF747ZPQ 212 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 212 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 212 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 212 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 212 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 212 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 212 bp overlap
ChIP hESC GSE20650.NANOG.hESC 205 bp overlap
ChIP hESC GSE18292.NANOG.hESC 63 bp overlap
NIPBL 4 datasets
ChIP WA09 GSE105028.NIPBL.WA09 212 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 192 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 180 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 186 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NR1D2 1 dataset
Motif ES_0h ES_0h-NR1D2_MA1532.2 15 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
PHOX2A 1 dataset
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 212 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 11 datasets
ChIP GM23338 ENCFF333SNB 157 bp overlap
ChIP H1 ENCFF698ZAP 199 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 212 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 168 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 212 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 209 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 212 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 212 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 212 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 140 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 154 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
PRRX2 1 dataset
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 172 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 99 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 212 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 176 bp overlap
RFX1 1 dataset
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX2 2 datasets
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RFX3 1 dataset
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RFX5 1 dataset
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
RORA 1 dataset
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif ES_0h ES_0h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif ES_0h ES_0h-RORC_MA1151.2 10 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 212 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 212 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 212 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 212 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 212 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 212 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 159 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 199 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 212 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 180 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 212 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 195 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 212 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 153 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 212 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 212 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 212 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 58 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 212 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 197 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 203 bp overlap
ChIP WTC11 ENCFF688PEU 212 bp overlap
TBP 2 datasets
ChIP hESC_10h GSE122298.TBP.hESC_10h 157 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 91 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 140 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 212 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 212 bp overlap
ChIP H1 ENCFF778PAX 161 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 212 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 138 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 185 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 190 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 212 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 158 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 176 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 205 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 199 bp overlap
ZNF701 1 dataset
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap
ZNF75A 1 dataset
Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap