chr4 : 10,118,141 – 10,119,240
1,099 bp 95 TFs 3 linked genes
This 1.1 kb open chromatin element is linked to ENSG00000289865, WDR1, and RNA5SP155 and is bound by 95 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289865 1.1 kb Proximal Proximity
WDR1 1.3 kb Proximal Proximity
RNA5SP155 2.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:10,113,141 – 10,124,240
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP K562 ENCFF751HCS 671 bp overlap
AHR 2 datasets
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 148 bp overlap
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 152 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 337 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 137 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 331 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 166 bp overlap
ChIP CD4 GSE59933.BCL6.CD4 120 bp overlap
BCLAF1 1 dataset
ChIP K-562 ENCSR000BKH.BCLAF1.K-562 306 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 265 bp overlap
BRD4 10 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 274 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 87 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 239 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 84 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 384 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 234 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 54 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 183 bp overlap
ChIP SEM GSE83671.BRD4.SEM 60 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 88 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 126 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 424 bp overlap
CTCF 3 datasets
ChIP GM17942 GSE76922.CTCF.GM17942 403 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 325 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 308 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 308 bp overlap
ChIP BLaER1 ENCFF335XTP 127 bp overlap
DMTF1 1 dataset
ChIP K562 ENCFF947QUY 491 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 306 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP LCL GSE75503.EBF1.LCL 126 bp overlap
EGR1 5 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 75 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 146 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 158 bp overlap
ChIP K562 ENCFF006PJY 100 bp overlap
ChIP K562 ENCFF895KGN 142 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 169 bp overlap
ESRRA 1 dataset
ChIP GM12878 ENCFF760DZX 357 bp overlap
FIP1L1 1 dataset
ChIP K-562 GSE120104.FIP1L1.K-562 249 bp overlap
HMBOX1 1 dataset
ChIP K562 ENCFF055GAZ 531 bp overlap
HNRNPK 3 datasets
ChIP K-562 GSE120104.HNRNPK.K-562 355 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 242 bp overlap
ChIP K562 ENCFF954RNO 297 bp overlap
HNRNPL 7 datasets
ChIP K-562 ENCSR594BNR.HNRNPL.K-562 147 bp overlap
ChIP K-562 GSE120104.HNRNPL.K-562 137 bp overlap
ChIP K-562 GSE120104.HNRNPL.K-562 496 bp overlap
ChIP K-562 ENCSR594BNR.HNRNPL.K-562 494 bp overlap
ChIP K562 ENCFF296JLL 477 bp overlap
ChIP K562 ENCFF779NTZ 298 bp overlap
ChIP K562 ENCFF779NTZ 477 bp overlap
HNRNPLL 1 dataset
ChIP K-562 GSE120104.HNRNPLL.K-562 243 bp overlap
HNRNPUL1 2 datasets
ChIP K-562 GSE120104.HNRNPUL1.K-562 370 bp overlap
ChIP K-562 ENCSR296MXW.HNRNPUL1.K-562 235 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 281 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 135 bp overlap
IKZF1 5 datasets
ChIP GM12878 ENCFF753XDO 155 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 525 bp overlap
ChIP K562 ENCFF771OHZ 190 bp overlap
ChIP K562 ENCFF771OHZ 185 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 195 bp overlap
IKZF2 5 datasets
ChIP GM12878 ENCFF238LYK 234 bp overlap
ChIP GM12878 ENCFF238LYK 601 bp overlap
ChIP GM12878 ENCFF918AID 225 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 208 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 239 bp overlap
ILF3 1 dataset
ChIP K-562 ENCSR632TJQ.ILF3.K-562 127 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 229 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 181 bp overlap
KAT7 1 dataset
ChIP K562 ENCFF175ZTN 677 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 54 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 112 bp overlap
KDM5B 1 dataset
ChIP K562 ENCFF049WWX 641 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 538 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 113 bp overlap
MED1 3 datasets
ChIP GM12878 GSE93080.MED1.GM12878 242 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 308 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 64 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 259 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 230 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 464 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 322 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 203 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 249 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 163 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 291 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 178 bp overlap
NFATC2 4 datasets
ChIP CD4 GSE116695.NFATC2.CD4 516 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 546 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 707 bp overlap
ChIP CD4_fly-DNA_no-CD28 GSE116695.NFATC2.CD4_fly-DNA_no-CD28 701 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 118 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 216 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 469 bp overlap
NONO 6 datasets
ChIP K-562 ENCSR886RYH.NONO.K-562 272 bp overlap
ChIP K-562 ENCSR010KFT.NONO.K-562 148 bp overlap
ChIP K562 ENCFF268WFF 317 bp overlap
ChIP K562 ENCFF782TAA 465 bp overlap
ChIP K562 ENCFF782TAA 465 bp overlap
ChIP K562 ENCFF844WQC 465 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 297 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 224 bp overlap
PAF1 2 datasets
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 188 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 326 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 375 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 172 bp overlap
PCBP2 5 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 178 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 192 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 192 bp overlap
ChIP K-562 GSE120104.PCBP2.K-562 220 bp overlap
ChIP K-562 ENCSR603REQ.PCBP2.K-562 221 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 377 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 104 bp overlap
POLR2A 34 datasets
ChIP GM12878 ENCFF263VRI 481 bp overlap
ChIP GM12878 ENCFF412KAE 944 bp overlap
ChIP GM12891 ENCFF127ICP 511 bp overlap
ChIP GM12891 ENCFF379FCI 501 bp overlap
ChIP GM12892 ENCFF245LYF 362 bp overlap
ChIP GM12892 ENCFF245LYF 545 bp overlap
ChIP GM12892 ENCFF245LYF 545 bp overlap
ChIP GM12892 ENCFF542ZFO 545 bp overlap
ChIP GM18526 ENCFF599EPS 119 bp overlap
ChIP GM18951 ENCFF079KKO 126 bp overlap
ChIP H1 ENCFF566JSR 797 bp overlap
ChIP H1 ENCFF566JSR 551 bp overlap
ChIP H1 ENCFF833NJP 153 bp overlap
ChIP HCT116 ENCFF508RDJ 465 bp overlap
ChIP HepG2 ENCFF252NAR 637 bp overlap
ChIP HepG2 ENCFF252NAR 637 bp overlap
ChIP HepG2 ENCFF252NAR 635 bp overlap
ChIP HepG2 ENCFF350RIU 300 bp overlap
ChIP HepG2 ENCFF350RIU 517 bp overlap
ChIP HepG2 ENCFF350RIU 517 bp overlap
ChIP HepG2 ENCFF736SLT 457 bp overlap
ChIP K562 ENCFF137JSF 130 bp overlap
ChIP K562 ENCFF137JSF 491 bp overlap
ChIP K562 ENCFF215CWW 1099 bp overlap
ChIP K562 ENCFF262YXJ 1099 bp overlap
ChIP K562 ENCFF514URW 264 bp overlap
ChIP K562 ENCFF514URW 170 bp overlap
ChIP K562 ENCFF643HGX 511 bp overlap
ChIP K562 ENCFF643HGX 511 bp overlap
ChIP K562 ENCFF836GHX 719 bp overlap
ChIP Raji ENCFF613VGX 521 bp overlap
ChIP Raji ENCFF613VGX 521 bp overlap
ChIP endothelial cell of umbilical vein ENCFF091YHT 291 bp overlap
ChIP thyroid gland ENCFF979LRR 412 bp overlap
POLR2G 8 datasets
ChIP HepG2 ENCFF241AEG 357 bp overlap
ChIP HepG2 ENCFF241AEG 641 bp overlap
ChIP K562 ENCFF047BLG 645 bp overlap
ChIP K562 ENCFF047BLG 217 bp overlap
ChIP K562 ENCFF047BLG 223 bp overlap
ChIP K562 ENCFF648YPL 645 bp overlap
ChIP K562 ENCFF648YPL 231 bp overlap
ChIP K562 ENCFF648YPL 224 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 321 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 478 bp overlap
ChIP K562 ENCFF740YLK 417 bp overlap
PRPF4 8 datasets
ChIP K-562 GSE120104.PRPF4.K-562 139 bp overlap
ChIP K-562 ENCSR220YXI.PRPF4.K-562 140 bp overlap
ChIP K-562 GSE120104.PRPF4.K-562 367 bp overlap
ChIP K-562 ENCSR220YXI.PRPF4.K-562 328 bp overlap
ChIP K562 ENCFF046WLD 392 bp overlap
ChIP K562 ENCFF046WLD 617 bp overlap
ChIP K562 ENCFF202AJJ 392 bp overlap
ChIP K562 ENCFF202AJJ 617 bp overlap
PTBP1 4 datasets
ChIP K-562 GSE120104.PTBP1.K-562 132 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 391 bp overlap
ChIP K562 ENCFF773HPT 199 bp overlap
ChIP K562 ENCFF773HPT 426 bp overlap
RBFOX2 3 datasets
ChIP HepG2 ENCFF554DMZ 445 bp overlap
ChIP K562 ENCFF196WTG 1099 bp overlap
ChIP K562 ENCFF967GRF 1099 bp overlap
RBM22 4 datasets
ChIP K562 ENCFF420JDS 537 bp overlap
ChIP K562 ENCFF420JDS 537 bp overlap
ChIP K562 ENCFF629OUL 525 bp overlap
ChIP K562 ENCFF629OUL 525 bp overlap
RBM39 4 datasets
ChIP K-562 ENCSR764OXF.RBM39.K-562 427 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 322 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 264 bp overlap
ChIP K-562 ENCSR764OXF.RBM39.K-562 288 bp overlap
RELA 1 dataset
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 112 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 340 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 291 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 207 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 138 bp overlap
SIRT6 2 datasets
ChIP K-562 ENCSR000AUB.SIRT6.K-562 255 bp overlap
ChIP K-562 ENCSR000AUB.SIRT6.K-562 391 bp overlap
SMAD3 3 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 342 bp overlap
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 340 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 333 bp overlap
SMAD5 1 dataset
ChIP K562 ENCFF941FJJ 467 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 292 bp overlap
SNRNP70 2 datasets
ChIP K-562 GSE120104.SNRNP70.K-562 261 bp overlap
ChIP K-562 ENCSR754ZHU.SNRNP70.K-562 234 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 122 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 56 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 166 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 188 bp overlap
SRSF4 3 datasets
ChIP K-562 GSE120104.SRSF4.K-562 185 bp overlap
ChIP K-562 GSE120104.SRSF4.K-562 356 bp overlap
ChIP K-562 GSE120104.SRSF4.K-562 330 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 437 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 347 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 477 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 146 bp overlap
SUPT5H 12 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 892 bp overlap
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 55 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 198 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 874 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 312 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 202 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 216 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 262 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 328 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 131 bp overlap
ChIP K562 ENCFF902PAW 1099 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 59 bp overlap
TAF1 3 datasets
ChIP K-562 ENCSR000BKS.TAF1.K-562 205 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 219 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 409 bp overlap
TBP 2 datasets
ChIP hESC GSE122298.TBP.hESC 554 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 110 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 524 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 98 bp overlap
XRCC5 6 datasets
ChIP K-562 GSE120104.XRCC5.K-562 160 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 350 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 316 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 151 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 119 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 116 bp overlap
YY1 4 datasets
ChIP GM12892 ENCFF802MHJ 317 bp overlap
ChIP GM12892 ENCSR000BLT.YY1.GM12892 141 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 113 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 142 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 234 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 396 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 373 bp overlap
ZC3H4 1 dataset
ChIP K562 ENCFF343JOP 401 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 125 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 171 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 363 bp overlap
ZNF592 1 dataset
ChIP K562 ENCFF547OSS 86 bp overlap
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