chr2 : 209,864,566 – 209,865,224

658 bp 90 TFs 0 linked genes

This 658 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

90 transcription factors

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 637 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 298 bp overlap

ATF2 1 dataset

ChIP H1 ENCFF295GZO 571 bp overlap

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 156 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

CEBPB 4 datasets

ChIP H1 ENCFF871PTR 261 bp overlap

ChIP Hep-G2 ENCSR000BQI.CEBPB.Hep-G2 136 bp overlap

ChIP HepG2 ENCFF536NTI 221 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 240 bp overlap

Cebpa 6 datasets

ChIP BLaER1 ENCFF031ISE 293 bp overlap

ChIP BLaER1 ENCFF262VBH 251 bp overlap

ChIP BLaER1 ENCFF364PUR 379 bp overlap

ChIP BLaER1 ENCFF460KDD 355 bp overlap

ChIP BLaER1 ENCFF896HSY 239 bp overlap

ChIP BLaER1 ENCFF896HSY 337 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 140 bp overlap

ERF::NHLH1 1 dataset

Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap

EZH2 2 datasets

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 198 bp overlap

ChIP hESC GSE113817.EZH2.hESC 228 bp overlap

FLI1 1 dataset

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 177 bp overlap

FOSL1::JUND 1 dataset

Motif DE_12h DE_12h-FOSL1JUND_MA1143.2 9 bp overlap

FOSL2::JUN 1 dataset

Motif DE_12h DE_12h-FOSL2JUN_MA1131.2 10 bp overlap

FOSL2::JUND 1 dataset

Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 552 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 139 bp overlap

GATA6 3 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 363 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 337 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 379 bp overlap

HDAC2 2 datasets

ChIP H1 ENCFF353UJQ 555 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 214 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 318 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 380 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 450 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 341 bp overlap

JUN::JUNB 1 dataset

Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap

JUND 2 datasets

Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap

ChIP H1 ENCFF468JZD 231 bp overlap

KLF14 1 dataset

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

KLF16 1 dataset

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

KLF9 1 dataset

Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap

MAX 1 dataset

ChIP H1 ENCFF914VQY 351 bp overlap

MAZ 1 dataset

Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap

NANOG 7 datasets

ChIP H1 ENCFF747ZPQ 88 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 401 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 258 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 183 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 282 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 296 bp overlap

ChIP hESC GSE20650.NANOG.hESC 151 bp overlap

NR1I2 1 dataset

Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

NR3C1 1 dataset

ChIP WTC11 ENCFF422OEM 555 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

OTX2 1 dataset

ChIP WTC11 ENCFF634NAO 245 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PATZ1 1 dataset

Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap

POU5F1 3 datasets

ChIP BG03 GSE21614.POU5F1.BG03 190 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 290 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 263 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 294 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 291 bp overlap

RARA::RXRG 1 dataset

Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap

Rfx6 1 dataset

Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 200 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 153 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 245 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 235 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 217 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 186 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 384 bp overlap

SP3 1 dataset

Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap

SP4 1 dataset

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SP8 1 dataset

Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

SUZ12 1 dataset

ChIP LNCaP GSE39459.SUZ12.LNCaP 197 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 286 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 251 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 134 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TEAD4 2 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

TP63 1 dataset

Motif DE_12h DE_12h-TP63_MA0525.2 18 bp overlap

TRIM28 2 datasets

ChIP AF22 GSE84259.TRIM28.AF22 226 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 276 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Vdr 2 datasets

Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap

YY1 1 dataset

ChIP HEK293T_control GSE128106.YY1.HEK293T_control 239 bp overlap

ZBTB21 1 dataset

ChIP WTC11 ENCFF677ZYY 401 bp overlap

ZFP57 1 dataset

ChIP hESC GSE115387.ZFP57.hESC 359 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 275 bp overlap

ZKSCAN1 1 dataset

Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF16 1 dataset

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 265 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF572 1 dataset

ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 172 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF740 1 dataset

Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

ZNF85 1 dataset

Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 357 bp overlap

ZNF93 1 dataset

Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap

ZSCAN16 1 dataset

Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap