chr2 : 165,761,410 165,762,013
603 bp 81 TFs 0 linked genes
This 603 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:165,756,410 – 165,767,013
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 303 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 245 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 167 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 301 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 216 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 441 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 446 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 301 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 248 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 359 bp overlap
ChIP DE DE-FOXA2-2 356 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 253 bp overlap
FOXL2 3 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 332 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 421 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 397 bp overlap
GATA2 1 dataset
Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 303 bp overlap
ChIP DE DE-GATA4-2 496 bp overlap
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 397 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 229 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 453 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 413 bp overlap
GATA5 1 dataset
Motif DE_12h DE_12h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 258 bp overlap
ChIP DE DE-GATA6-2 513 bp overlap
Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 601 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 561 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 592 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 589 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 560 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 573 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 427 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 279 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 422 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 315 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 375 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 449 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 431 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 275 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 204 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Gata3 1 dataset
Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 527 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 586 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 470 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 293 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 591 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 296 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 224 bp overlap
KMT2B 1 dataset
ChIP HEK293T_C-term GSE90762.KMT2B.HEK293T_C-term 203 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 210 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 291 bp overlap
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 162 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 153 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 590 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 531 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 603 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 603 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 603 bp overlap
ChIP hESC GSE18292.NANOG.hESC 106 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 264 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POU5F1 6 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 381 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 507 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 219 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 368 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 540 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 558 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
PRDM6 4 datasets
ChIP HEK293 ENCFF283AJL 344 bp overlap
ChIP HEK293 ENCFF283AJL 112 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 464 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 243 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 289 bp overlap
RFX1 3 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 250 bp overlap
ChIP K562 ENCFF421AVO 314 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 212 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 324 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 332 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 415 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 229 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 323 bp overlap
SMARCA4 2 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 215 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 580 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 367 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 496 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 536 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 354 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 417 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 223 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 264 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TP53 3 datasets
ChIP H9 GSE142050.TP53.H9 364 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 93 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 291 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 603 bp overlap
ChIP HEK293 ENCFF582MWI 576 bp overlap
ChIP HEK293 ENCFF582MWI 375 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 236 bp overlap
TRPS1 1 dataset
Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 387 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 445 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 602 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 162 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 501 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 341 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 300 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 496 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 346 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 185 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 153 bp overlap
ZNF778 2 datasets
ChIP HEK293 GSE76494.ZNF778.HEK293 234 bp overlap
ChIP HEK293T GSE78099.ZNF778.HEK293T 275 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 436 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 262 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 525 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 317 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap