chr2 : 107,418,734 107,419,732
998 bp 114 TFs 0 linked genes
This 998 bp open chromatin element has no linked target genes and is bound by 114 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:107,413,734 – 107,424,732
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 206 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 101 bp overlap
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 287 bp overlap
ChIP HepG2 ENCFF955VER 337 bp overlap
BRD4 4 datasets
ChIP RH4 GSE83726.BRD4.RH4 998 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 327 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 269 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 987 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 248 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 230 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 115 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 497 bp overlap
ChIP RH5 GSE155861.CHD4.RH5 229 bp overlap
CTCF 2 datasets
ChIP RH4 GSE83726.CTCF.RH4 296 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 390 bp overlap
DPRX 2 datasets
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 383 bp overlap
EHF 1 dataset
Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 209 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 265 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 359 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 553 bp overlap
Elf5 1 dataset
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA1 8 datasets
ChIP LAPC-4_CST_V5 GSE123618.FOXA1.LAPC-4_CST_V5 217 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 285 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 248 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 251 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 402 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 380 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 337 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 274 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 811 bp overlap
ChIP DE DE-FOXA2-2 795 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 469 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXC1 3 datasets
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD3 2 datasets
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 704 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 751 bp overlap
GATA2 3 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP SH-SY5Y ENCFF485YIB 318 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 278 bp overlap
GATA3 2 datasets
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 404 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 142 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 755 bp overlap
ChIP DE DE-GATA4-2 924 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 276 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 278 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 507 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 290 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 267 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 998 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 624 bp overlap
ChIP DE DE-GATA6-2 924 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 457 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 916 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 848 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 857 bp overlap
GCM1 2 datasets
Motif DE_48h DE_48h-GCM1_MA0646.2 10 bp overlap
Motif DE_60h DE_60h-GCM1_MA0646.2 10 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Gli1 2 datasets
Motif DE_48h DE_48h-Gli1_MA1990.2 10 bp overlap
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 563 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 279 bp overlap
HDAC2 3 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 404 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 322 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 786 bp overlap
HDAC3 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 384 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 463 bp overlap
HOXA3 2 datasets
Motif DE_48h DE_48h-HOXA3_MA2119.1 7 bp overlap
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXA4 2 datasets
Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap
Motif DE_60h DE_60h-HOXA4_MA1496.2 7 bp overlap
HOXB4 2 datasets
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
HSF1 2 datasets
Motif DE_48h DE_48h-HSF1_MA0486.2 13 bp overlap
Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap
HSF2 2 datasets
Motif DE_48h DE_48h-HSF2_MA0770.1 13 bp overlap
Motif DE_60h DE_60h-HSF2_MA0770.1 13 bp overlap
HSF4 2 datasets
Motif DE_48h DE_48h-HSF4_MA0771.1 13 bp overlap
Motif DE_60h DE_60h-HSF4_MA0771.1 13 bp overlap
Hic1 2 datasets
Motif DE_48h DE_48h-Hic1_MA0739.2 8 bp overlap
Motif DE_60h DE_60h-Hic1_MA0739.2 8 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 232 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 431 bp overlap
KDM1A 3 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 330 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 314 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 213 bp overlap
MED1 2 datasets
ChIP RH4 GSE83726.MED1.RH4 394 bp overlap
ChIP RH4 GSE83726.MED1.RH4 500 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 304 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 205 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 860 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 173 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 212 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 357 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 210 bp overlap
MYOD1 5 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 992 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 784 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 349 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 125 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 174 bp overlap
MYOG 4 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 166 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 630 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 664 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 789 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 164 bp overlap
NFIC 1 dataset
Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 190 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 296 bp overlap
NKX6-1 2 datasets
Motif DE_48h DE_48h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_60h DE_60h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 2 datasets
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_60h DE_60h-NKX6-3_MA1530.2 8 bp overlap
Nr2e3 2 datasets
Motif DE_48h DE_48h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 264 bp overlap
PAX3-FOXO1 3 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 588 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 364 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 492 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 594 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF748YVT 445 bp overlap
POU2F1 1 dataset
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
POU5F1 1 dataset
Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap
PRDM1 1 dataset
Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap
RAD21 2 datasets
ChIP RH4 GSE83726.RAD21.RH4 359 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 390 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 766 bp overlap
RCOR1 3 datasets
ChIP SK-N-SH ENCFF518EXB 272 bp overlap
ChIP SK-N-SH ENCFF518EXB 365 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 227 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 88 bp overlap
RFX1 2 datasets
Motif DE_48h DE_48h-RFX1_MA0509.3 16 bp overlap
Motif DE_60h DE_60h-RFX1_MA0509.3 16 bp overlap
RFX2 2 datasets
Motif DE_48h DE_48h-RFX2_MA0600.3 14 bp overlap
Motif DE_60h DE_60h-RFX2_MA0600.3 14 bp overlap
RFX3 2 datasets
Motif DE_48h DE_48h-RFX3_MA0798.3 16 bp overlap
Motif DE_60h DE_60h-RFX3_MA0798.3 16 bp overlap
RFX5 3 datasets
Motif DE_48h DE_48h-RFX5_MA0510.3 14 bp overlap
Motif DE_60h DE_60h-RFX5_MA0510.3 14 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 154 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 437 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 529 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 501 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 162 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 71 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 170 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 168 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 249 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 246 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 332 bp overlap
SOX18 2 datasets
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
SOX8 5 datasets
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
ChIP RH4 GSE116344.SOX8.RH4 508 bp overlap
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 409 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 961 bp overlap
SPIB 2 datasets
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 354 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 360 bp overlap
ZBTB26 2 datasets
Motif DE_48h DE_48h-ZBTB26_MA1579.2 8 bp overlap
Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap
ZBTB7C 1 dataset
Motif DE_60h DE_60h-ZBTB7C_MA0695.2 8 bp overlap
ZNF140 2 datasets
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
ZNF213 2 datasets
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF317 1 dataset
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap
ZNF582 1 dataset
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
ZNF75A 2 datasets
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 172 bp overlap
Zfp961 2 datasets
Motif DE_48h DE_48h-Zfp961_MA2126.1 8 bp overlap
Motif DE_60h DE_60h-Zfp961_MA2126.1 8 bp overlap
Znf423 2 datasets
Motif DE_48h DE_48h-Znf423_MA0116.1 15 bp overlap
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap