chrX : 117,327,357 117,327,673
316 bp 108 TFs 0 linked genes
This 316 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:117,322,357 – 117,332,673
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ALX3 1 dataset
Motif ES_0h ES_0h-ALX3_MA0634.2 6 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 316 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 224 bp overlap
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 173 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 93 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 308 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 134 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 128 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 316 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 261 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 316 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 203 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 316 bp overlap
DRGX 1 dataset
Motif ES_0h ES_0h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif ES_0h ES_0h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif ES_0h ES_0h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif ES_0h ES_0h-EN1_MA0027.3 6 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 155 bp overlap
ChIP hESC GSE17917.EP300.hESC 316 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 122 bp overlap
EVX1 1 dataset
Motif ES_0h ES_0h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif ES_0h ES_0h-EVX2_MA0888.2 6 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 224 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 79 bp overlap
GSX1 1 dataset
Motif ES_0h ES_0h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif ES_0h ES_0h-GSX2_MA0893.3 7 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 127 bp overlap
HOXA1 1 dataset
Motif ES_0h ES_0h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif ES_0h ES_0h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
Motif ES_0h ES_0h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif ES_0h ES_0h-HOXA4_MA1496.2 7 bp overlap
HOXA6 1 dataset
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif ES_0h ES_0h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif ES_0h ES_0h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif ES_0h ES_0h-HOXB3_MA0903.2 6 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXB5 1 dataset
Motif ES_0h ES_0h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXC8 1 dataset
Motif ES_0h ES_0h-HOXC8_MA1505.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
HOXD8 1 dataset
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
ISX 1 dataset
Motif ES_0h ES_0h-ISX_MA0654.2 6 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 212 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 316 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 316 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 316 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 236 bp overlap
KLF4 2 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 316 bp overlap
ChIP WA09 GSE105028.KLF4.WA09 229 bp overlap
LHX5 1 dataset
Motif ES_0h ES_0h-LHX5_MA1519.2 7 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
Lhx4 1 dataset
Motif ES_0h ES_0h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif ES_0h ES_0h-Lhx8_MA0705.2 6 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 113 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif ES_0h ES_0h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif ES_0h ES_0h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif ES_0h ES_0h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif ES_0h ES_0h-MNX1_MA0707.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 184 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 244 bp overlap
ChIP GM23338 ENCFF065NZG 182 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 316 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 316 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 316 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 316 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 316 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 316 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 316 bp overlap
ChIP hESC GSE18292.NANOG.hESC 316 bp overlap
ChIP hESC GSE20650.NANOG.hESC 316 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 316 bp overlap
NKX6-2 1 dataset
Motif ES_0h ES_0h-NKX6-2_MA0675.2 6 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NOTCH1 2 datasets
ChIP GSC8-11_12d-das GSE74557.NOTCH1.GSC8-11_12d-das 130 bp overlap
ChIP GSC8-11_dasatinib GSE74557.NOTCH1.GSC8-11_dasatinib 189 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 179 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 267 bp overlap
PDX1 2 datasets
Motif ES_0h ES_0h-PDX1_MA0132.3 6 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 79 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 91 bp overlap
POU5F1 15 datasets
ChIP BG03 GSE21614.POU5F1.BG03 316 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 305 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 316 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 311 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 316 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 251 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 316 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 309 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 316 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 316 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 316 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 316 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 300 bp overlap
POU6F1 1 dataset
Motif ES_0h ES_0h-POU6F1_MA0628.2 6 bp overlap
PRDM14 2 datasets
ChIP hESC GSE22767.PRDM14.hESC 316 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 140 bp overlap
PRRX1 1 dataset
Motif ES_0h ES_0h-PRRX1_MA0716.2 6 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 316 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 316 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 316 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 316 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 257 bp overlap
RAX2 1 dataset
Motif ES_0h ES_0h-RAX2_MA0717.2 6 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 309 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 250 bp overlap
RFX1 1 dataset
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX2 1 dataset
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 237 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 199 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 301 bp overlap
SHOX 1 dataset
Motif ES_0h ES_0h-SHOX_MA0630.2 6 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 316 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 149 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 160 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 316 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 316 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 316 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 316 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 316 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 316 bp overlap
SOX2 7 datasets
ChIP H9 GSE46837.SOX2.H9 145 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 316 bp overlap
ChIP NPC GSE122631.SOX2.NPC 291 bp overlap
ChIP hESC GSE69479.SOX2.hESC 288 bp overlap
ChIP hESC GSE18292.SOX2.hESC 273 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 316 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 259 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 315 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 135 bp overlap
Shox2 1 dataset
Motif ES_0h ES_0h-Shox2_MA0720.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 88 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 123 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 308 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 285 bp overlap
TLX2 1 dataset
Motif ES_0h ES_0h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif ES_0h ES_0h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif ES_0h ES_0h-VAX2_MA0723.3 6 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 199 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF143 1 dataset
ChIP WA09 GSE105028.ZNF143.WA09 288 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 316 bp overlap
ZNF317 1 dataset
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF35 1 dataset
Motif ES_0h ES_0h-ZNF35_MA2333.1 7 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 144 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 288 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
mix-a 1 dataset
Motif ES_0h ES_0h-mix-a_MA0621.2 7 bp overlap