chr22 : 40,187,442 40,188,012
570 bp 86 TFs 5 linked genes
This 570 bp open chromatin element is linked to 5 target genes and is bound by 86 transcription factors.
Linked Genes
5 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
TNRC6B 9.5 kb Proximal Proximity
ADSL 158.8 kb Distal Multiome
SGSM3 182.9 kb Distal Multiome
FAM83F 192.7 kb Distal Multiome
ATF4 667.1 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:40,182,442 – 40,193,012
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 359 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 236 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 180 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 280 bp overlap
ChIP K562 ENCFF403WPG 512 bp overlap
CTCF 22 datasets
ChIP DND41 ENCSR000AQU.CTCF.DND41 191 bp overlap
ChIP GM23338 ENCFF531QOI 316 bp overlap
ChIP H1 ENCFF414GZI 205 bp overlap
ChIP H9 ENCFF152GTF 313 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 232 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 208 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 263 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 183 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 240 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 213 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 112 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 125 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 295 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 147 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 157 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 164 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 232 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 144 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 234 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF400DFR 241 bp overlap
ChIP endodermal cell ENCFF471YCZ 154 bp overlap
EOMES 1 dataset
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
FIGLA 1 dataset
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 255 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 303 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 307 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 243 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 237 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 315 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 407 bp overlap
ChIP DE DE-FOXA2-1 513 bp overlap
ChIP DE DE-FOXA2-2 535 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 304 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 453 bp overlap
ChIP K-562 ENCSR508DQA.FOXK2.K-562 336 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 267 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 508 bp overlap
ChIP DE DE-GATA4-2 536 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 446 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 368 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 507 bp overlap
ChIP DE DE-GATA6-2 554 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 475 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 501 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 505 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 453 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 529 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 511 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 238 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 386 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 378 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 345 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 526 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 339 bp overlap
ChIP K562 ENCFF968WBH 466 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 157 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 306 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 213 bp overlap
ChIP K562 ENCFF771OHZ 386 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 307 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 284 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 427 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 388 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 175 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 169 bp overlap
KDM1A 1 dataset
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 206 bp overlap
KMT2A 3 datasets
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 58 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 461 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 516 bp overlap
MAFF 1 dataset
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 115 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 375 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 387 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 318 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 296 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 238 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 205 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 521 bp overlap
ChIP HEK293 ENCFF016MNJ 320 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 236 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 210 bp overlap
PHIP 2 datasets
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 130 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 278 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 414 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 280 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 208 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 167 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 305 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 234 bp overlap
ChIP H1 ENCFF967OJF 202 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 212 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 211 bp overlap
RBBP5 2 datasets
ChIP K-562 ENCSR000AQI.RBBP5.K-562 129 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 200 bp overlap
RBM39 2 datasets
ChIP K-562 ENCSR764OXF.RBM39.K-562 157 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 157 bp overlap
REST 1 dataset
ChIP K-562 ENCSR137ZMQ.REST.K-562 286 bp overlap
RREB1 1 dataset
Motif DE_48h DE_48h-RREB1_MA0073.2 19 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 175 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 507 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 521 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 570 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 415 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 417 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 565 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 533 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 473 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 159 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 301 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 266 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 217 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 265 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 108 bp overlap
TBR1 1 dataset
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Tbx6 1 dataset
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
VEZF1 1 dataset
Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap
Wt1 2 datasets
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 335 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZEB1 1 dataset
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 364 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 384 bp overlap
ChIP K562 ENCFF795CMH 423 bp overlap
ChIP K562 ENCFF975RXS 420 bp overlap
ZNF18 2 datasets
ChIP HEK293 GSE76494.ZNF18.HEK293 232 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 266 bp overlap
ZNF257 1 dataset
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 267 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 383 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 443 bp overlap
ZNF75A 1 dataset
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
Zfp961 1 dataset
Motif DE_48h DE_48h-Zfp961_MA2126.1 8 bp overlap