chr20 : 22,601,426 22,601,921
495 bp 118 TFs 0 linked genes
This 495 bp open chromatin element has no linked target genes and is bound by 118 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:22,596,426 – 22,606,921
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
118 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 57 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 476 bp overlap
BARX1 1 dataset
Motif DE_72h DE_72h-BARX1_MA0875.2 6 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 132 bp overlap
BRD4 1 dataset
ChIP COLO-205 GSE73319.BRD4.COLO-205 495 bp overlap
BRD9 1 dataset
ChIP Mel270_DMSO GSE124720.BRD9.Mel270_DMSO 122 bp overlap
BSX 1 dataset
Motif DE_72h DE_72h-BSX_MA0876.2 6 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 216 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 272 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 321 bp overlap
ChIP K562 ENCFF673OEZ 162 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 208 bp overlap
CEBPB 1 dataset
ChIP A549 ENCFF235AIY 257 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRC.CREB1.A-549 124 bp overlap
CTCFL 1 dataset
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 351 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 211 bp overlap
DLX1 1 dataset
Motif DE_72h DE_72h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_72h DE_72h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_72h DE_72h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_72h DE_72h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_72h DE_72h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_72h DE_72h-Dlx5_MA1476.3 8 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 319 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 333 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 360 bp overlap
EP300 1 dataset
ChIP A-549 ENCSR000BPW.EP300.A-549 225 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 239 bp overlap
FOS 6 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 495 bp overlap
Motif DE_72h DE_72h-FOS_MA0476.2 8 bp overlap
ChIP K-562 ENCSR000DKB.FOS.K-562 158 bp overlap
ChIP MCF-7 ENCFF282FWZ 261 bp overlap
ChIP MCF-7 ENCFF282FWZ 163 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 495 bp overlap
FOSL1 5 datasets
ChIP 143B GSE74230.FOSL1.143B 224 bp overlap
ChIP 143B GSE74230.FOSL1.143B 143 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 495 bp overlap
ChIP K562 ENCFF455MKD 353 bp overlap
ChIP MNNG-HOS GSE74230.FOSL1.MNNG-HOS 155 bp overlap
FOSL2 9 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 243 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 266 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 136 bp overlap
ChIP A549 ENCFF195CES 311 bp overlap
Motif DE_72h DE_72h-FOSL2_MA0478.2 10 bp overlap
Motif DE_72h DE_72h-FOSL2_MA0478.2 10 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF548CXY 303 bp overlap
ChIP HepG2 ENCFF796NIA 251 bp overlap
FOXA1 19 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 250 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 249 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 495 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 493 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 429 bp overlap
ChIP HepG2 ENCFF207NVJ 272 bp overlap
ChIP HepG2 ENCFF740VZW 251 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 158 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 241 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 119 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 192 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 207 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 303 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 245 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 495 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 495 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 478 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 268 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 218 bp overlap
FOXA2 11 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 393 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 441 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 397 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 495 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 100 bp overlap
ChIP DE DE-FOXA2-1 413 bp overlap
ChIP DE DE-FOXA2-2 424 bp overlap
ChIP HepG2 ENCFF533COJ 266 bp overlap
ChIP HepG2 ENCFF570ABM 212 bp overlap
ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 196 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 259 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 176 bp overlap
FOXO6 1 dataset
Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 388 bp overlap
ChIP DE DE-GATA4-2 485 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 388 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 380 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 301 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 355 bp overlap
ChIP DE DE-GATA6-2 446 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 495 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 495 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 495 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 422 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 495 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 495 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 159 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 495 bp overlap
ChIP foregut GSE117136.GATA6.foregut 464 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 438 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 259 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 327 bp overlap
GBX2 1 dataset
Motif DE_72h DE_72h-GBX2_MA0890.2 6 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HESX1 1 dataset
Motif DE_72h DE_72h-HESX1_MA0894.2 6 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 110 bp overlap
HNF1A 1 dataset
ChIP NY15 GSE108150.HNF1A.NY15 317 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 82 bp overlap
HNF4A 6 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 183 bp overlap
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 159 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 352 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 493 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 466 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 255 bp overlap
HOXA5 1 dataset
Motif DE_72h DE_72h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_72h DE_72h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_72h DE_72h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_72h DE_72h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_72h DE_72h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_72h DE_72h-HOXB8_MA1502.2 7 bp overlap
HOXD8 1 dataset
Motif DE_72h DE_72h-HOXD8_MA0910.3 7 bp overlap
Hmx3 1 dataset
Motif DE_72h DE_72h-Hmx3_MA0898.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 230 bp overlap
INSM1 1 dataset
Motif DE_72h DE_72h-INSM1_MA0155.1 12 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 495 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 280 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 495 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 495 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 495 bp overlap
JUNB 4 datasets
ChIP A549 ENCFF251BPG 402 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 495 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 181 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 127 bp overlap
JUND 1 dataset
ChIP A-549 ENCSR000BRF.JUND.A-549 107 bp overlap
LBX2 1 dataset
Motif DE_72h DE_72h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_72h DE_72h-LHX2_MA0700.3 6 bp overlap
Lef1 1 dataset
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
MGA 3 datasets
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 213 bp overlap
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 156 bp overlap
ChIP A-549_empty GSE112188.MGA.A-549_empty 191 bp overlap
MITF 3 datasets
ChIP 501-mel GSE137522.MITF.501-mel 89 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 72 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 119 bp overlap
MSX1 1 dataset
Motif DE_72h DE_72h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_72h DE_72h-MSX2_MA0708.3 6 bp overlap
MYB 1 dataset
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 314 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 241 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 279 bp overlap
Msx3 1 dataset
Motif DE_72h DE_72h-Msx3_MA0709.2 6 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 261 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 189 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 143 bp overlap
NR5A2 1 dataset
ChIP A-549 ENCSR190GIW.NR5A2.A-549 237 bp overlap
Nfat5 1 dataset
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nobox 1 dataset
Motif DE_72h DE_72h-Nobox_MA0125.2 6 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 212 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF607ZPU 238 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 316 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 226 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 155 bp overlap
Prdm4 1 dataset
Motif DE_72h DE_72h-Prdm4_MA1647.3 11 bp overlap
RAX 1 dataset
Motif DE_72h DE_72h-RAX_MA0718.2 6 bp overlap
REST 1 dataset
Motif DE_72h DE_72h-REST_MA0138.3 20 bp overlap
SMAD2 1 dataset
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 461 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 449 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 430 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 430 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 437 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 410 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 310 bp overlap
SMAD3 2 datasets
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 244 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 294 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 157 bp overlap
SMARCA4 12 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 126 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 157 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 475 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 315 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 141 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 141 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 163 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 220 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 120 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 192 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 252 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 495 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 249 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 246 bp overlap
STAT3 2 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 157 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 120 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
Stat4 1 dataset
Motif DE_72h DE_72h-Stat4_MA0518.2 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 292 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 223 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 173 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 169 bp overlap
TCF7 2 datasets
Motif DE_72h DE_72h-TCF7_MA0769.3 7 bp overlap
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 155 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 197 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 290 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 268 bp overlap
ZIM3 2 datasets
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF331 1 dataset
Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap
ZNF582 1 dataset
Motif DE_72h DE_72h-ZNF582_MA1983.2 19 bp overlap
ZNF768 1 dataset
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap