chr17:4,708,553–4,709,232

chr17 : 4,708,553 – 4,709,232

679 bp 71 TFs 14 linked genes

This 679 bp open chromatin element is linked to 14 target genes and is bound by 71 transcription factors.

Linked Genes

14 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ARRB2		1.4 kb	Proximal	Proximity
PELP1-DT		4.3 kb	Proximal	Proximity
PELP1		4.4 kb	Proximal	Proximity
MED11		22.7 kb	Distal	Multiome
PSMB6		87.4 kb	Distal	Multiome
PLD2		98.4 kb	Distal	Multiome
MINK1		124.7 kb	Distal	Multiome
MYBBP1A		153.3 kb	Distal	Multiome
SLC25A11		231.3 kb	Distal	Multiome
RNF167		231.4 kb	Distal	Multiome
PFN1		239.8 kb	Distal	Multiome
ENO3		242.4 kb	Distal	Multiome
SPAG7		259.1 kb	Distal	Multiome
KIF1C		289.2 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

71 transcription factors

ASH1L 1 dataset

ChIP K562 ENCFF808EMX 378 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 69 bp overlap

ChIP Jurkat GSE50622.CDK7.Jurkat 87 bp overlap

ChIP SCMC GSE155861.CHD4.SCMC 83 bp overlap

DMAP1 1 dataset

ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 88 bp overlap

ChIP HepG2 ENCFF818WYO 425 bp overlap

DRAP1 2 datasets

ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 164 bp overlap

ChIP HepG2 ENCFF296JHR 243 bp overlap

ChIP GM12878 ENCFF432UGA 88 bp overlap

ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 71 bp overlap

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 63 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 217 bp overlap

ChIP Hep-G2 ENCSR177HDZ.FOS.Hep-G2 130 bp overlap

GATA3 1 dataset

ChIP Jurkat GSE120063.GATA3.Jurkat 50 bp overlap

GTF2F1 7 datasets

ChIP H1 ENCFF399TGL 226 bp overlap

ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 162 bp overlap

ChIP Hep-G2 ENCSR382PVA.GTF2F1.Hep-G2 121 bp overlap

ChIP HepG2 ENCFF486CCX 202 bp overlap

ChIP HepG2 ENCFF656MNI 275 bp overlap

ChIP HepG2 ENCFF918PMU 269 bp overlap

ChIP WA01 ENCSR000EBP.GTF2F1.WA01 108 bp overlap

HMGXB4 2 datasets

ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 106 bp overlap

ChIP HepG2 ENCFF032DND 384 bp overlap

HOXA5 1 dataset

ChIP HepG2 ENCFF580MCT 82 bp overlap

ChIP GM12878 ENCFF475ZIG 254 bp overlap

KDM5B 3 datasets

ChIP HepG2 ENCFF706LUI 410 bp overlap

ChIP K-562 ENCSR000AQA.KDM5B.K-562 77 bp overlap

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 93 bp overlap

ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 87 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 92 bp overlap

KMT2A 1 dataset

ChIP blood_cord GSE83671.KMT2A.blood_cord 86 bp overlap

LIN54 2 datasets

ChIP HepG2 ENCFF662XDE 593 bp overlap

ChIP HepG2 ENCFF662XDE 622 bp overlap

ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 167 bp overlap

MAFK 2 datasets

ChIP A549 ENCFF371EPR 327 bp overlap

ChIP HepG2 ENCFF743ZOF 237 bp overlap

MED1 2 datasets

ChIP Jurkat GSE59657.MED1.Jurkat 88 bp overlap

ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 143 bp overlap

ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 61 bp overlap

ChIP Jurkat GSE59657.MYB.Jurkat 122 bp overlap

ChIP MOLT-3 GSE59657.MYB.MOLT-3 122 bp overlap

MYBL2 3 datasets

ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 102 bp overlap

ChIP HepG2 ENCFF176QIX 512 bp overlap

ChIP HepG2 ENCFF176QIX 548 bp overlap

NELFA 1 dataset

ChIP BT-474_INHHDAC ERP010664.NELFA.BT-474_INHHDAC 119 bp overlap

NEUROD1 2 datasets

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 100 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 77 bp overlap

NFATC3 2 datasets

ChIP K562 ENCFF078EKB 375 bp overlap

ChIP K562 ENCFF078EKB 451 bp overlap

NFYA 8 datasets

ChIP HeLa-S3 ENCSR000DNS.NFYA.HeLa-S3 196 bp overlap

ChIP Hep-G2 ENCSR124APT.NFYA.Hep-G2 173 bp overlap

ChIP HepG2 ENCFF883OMO 266 bp overlap

ChIP HepG2 ENCFF883OMO 437 bp overlap

ChIP K-562 GSE26439.NFYA.K-562 191 bp overlap

ChIP K-562 ENCSR000EGR.NFYA.K-562 141 bp overlap

ChIP K562 ENCFF666BET 270 bp overlap

ChIP K562 ENCFF732HOX 367 bp overlap

NFYB 11 datasets

ChIP GM12878 ENCFF474DNH 222 bp overlap

ChIP GM12878 ENCFF474DNH 381 bp overlap

ChIP GM12878 ENCSR000DNM.NFYB.GM12878 230 bp overlap

ChIP HeLa-S3 ENCFF854TNJ 214 bp overlap

ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 217 bp overlap

ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 189 bp overlap

ChIP HepG2 ENCFF174VYX 381 bp overlap

ChIP K-562 ENCSR000EGQ.NFYB.K-562 232 bp overlap

ChIP K-562 GSE26439.NFYB.K-562 232 bp overlap

ChIP K562 ENCFF709RXX 234 bp overlap

ChIP WTC11 ENCFF751ZTQ 230 bp overlap

NFYC 2 datasets

ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 171 bp overlap

ChIP HepG2 ENCFF836FYP 363 bp overlap

NONO 5 datasets

ChIP Hep-G2 ENCSR923UTX.NONO.Hep-G2 179 bp overlap

ChIP Hep-G2 GSE120104.NONO.Hep-G2 179 bp overlap

ChIP HepG2 ENCFF313ACY 296 bp overlap

ChIP HepG2 ENCFF313ACY 301 bp overlap

ChIP HepG2 ENCFF819JPN 299 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 172 bp overlap

ChIP HepG2 ENCFF029WNT 422 bp overlap

POGZ 2 datasets

ChIP HepG2 ENCFF153UUK 454 bp overlap

ChIP HepG2 ENCFF153UUK 517 bp overlap

POLR2A 31 datasets

ChIP GM12878 ENCFF263VRI 287 bp overlap

ChIP GM12878 ENCFF412KAE 170 bp overlap

ChIP GM12878 ENCFF521FXC 173 bp overlap

ChIP GM12891 ENCFF012SUT 287 bp overlap

ChIP GM12891 ENCFF127ICP 293 bp overlap

ChIP GM12891 ENCFF379FCI 297 bp overlap

ChIP GM12892 ENCFF245LYF 323 bp overlap

ChIP GM12892 ENCFF506PGQ 257 bp overlap

ChIP GM12892 ENCFF542ZFO 321 bp overlap

ChIP GM19099 ENCFF726IBN 271 bp overlap

ChIP GM23338 ENCFF450WCS 149 bp overlap

ChIP H1 ENCFF566JSR 236 bp overlap

ChIP H1 ENCFF770YBQ 264 bp overlap

ChIP H1 ENCFF833NJP 124 bp overlap

ChIP HCT116 ENCFF508RDJ 299 bp overlap

ChIP HeLa-S3 ENCFF773DNG 212 bp overlap

ChIP HepG2 ENCFF252NAR 334 bp overlap

ChIP HepG2 ENCFF350RIU 227 bp overlap

ChIP HepG2 ENCFF718XAJ 149 bp overlap

ChIP HepG2 ENCFF736SLT 201 bp overlap

ChIP PFSK-1 ENCFF576NIT 289 bp overlap

ChIP Raji ENCFF613VGX 201 bp overlap

ChIP body of pancreas ENCFF501FEC 199 bp overlap

ChIP body of pancreas ENCFF675RCN 145 bp overlap

ChIP body of pancreas ENCFF727UBE 256 bp overlap

ChIP erythroblast ENCFF498VMR 421 bp overlap

ChIP esophagus muscularis mucosa ENCFF791ZXN 317 bp overlap

ChIP heart left ventricle ENCFF591JWH 258 bp overlap

ChIP neural cell ENCFF604SPB 249 bp overlap

ChIP thyroid gland ENCFF979LRR 313 bp overlap

ChIP upper lobe of left lung ENCFF199JUI 269 bp overlap

POLR2G 2 datasets

ChIP HepG2 ENCFF241AEG 251 bp overlap

ChIP HepG2 ENCFF508UTS 291 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 184 bp overlap

RBFOX2 3 datasets

ChIP HepG2 ENCFF554DMZ 198 bp overlap

ChIP HepG2 ENCFF554DMZ 257 bp overlap

ChIP HepG2 ENCFF939HTZ 220 bp overlap

RBM25 3 datasets

ChIP K-562 ENCSR791OZM.RBM25.K-562 176 bp overlap

ChIP K562 ENCFF248CGR 249 bp overlap

ChIP K562 ENCFF957ORK 250 bp overlap

RBM39 1 dataset

ChIP HepG2 ENCFF801JUH 404 bp overlap

RUNX2 2 datasets

ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 142 bp overlap

ChIP PER-117 GSE151819.RUNX2.PER-117 107 bp overlap

RUNX3 1 dataset

ChIP GM12878 ENCFF395WHA 129 bp overlap

SMAD3 1 dataset

ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 128 bp overlap

SMAD5 1 dataset

ChIP GM12878 ENCSR251OVJ.SMAD5.GM12878 51 bp overlap

ChIP GM12878 ENCSR000BHK.SP1.GM12878 132 bp overlap

ChIP H1 ENCFF263FUH 268 bp overlap

ChIP HCT116 ENCFF800LBN 345 bp overlap

ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 131 bp overlap

ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 139 bp overlap

ChIP HepG2 ENCFF123KAM 250 bp overlap

ChIP HepG2 ENCFF458MVB 245 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 158 bp overlap

ChIP HEK293 ENCFF181QXT 320 bp overlap

ChIP HEK293 ENCFF087XLA 392 bp overlap

ChIP HepG2 ENCFF865DSQ 419 bp overlap

ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 124 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 216 bp overlap

SUPT5H 3 datasets

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 152 bp overlap

ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 233 bp overlap

ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 190 bp overlap

TAF1 5 datasets

ChIP H1 ENCFF478SZO 107 bp overlap

ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 156 bp overlap

ChIP HepG2 ENCFF946IUP 386 bp overlap

ChIP HepG2 ENCFF946IUP 515 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 139 bp overlap

TBP 16 datasets

ChIP GM12878 ENCFF571OXR 253 bp overlap

ChIP H1 ENCFF859IIO 166 bp overlap

ChIP HeLa-S3 ENCFF715NNJ 267 bp overlap

ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 145 bp overlap

ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 175 bp overlap

ChIP HepG2 ENCFF023IVD 213 bp overlap

ChIP K-562 GSE55306.TBP.K-562 190 bp overlap

ChIP K-562 ENCSR000EHA.TBP.K-562 143 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 162 bp overlap

ChIP hESC GSE122298.TBP.hESC 177 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 155 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 164 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 153 bp overlap

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 107 bp overlap

ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 192 bp overlap

ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 221 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 141 bp overlap

ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 70 bp overlap

ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 184 bp overlap

ChIP Ishikawa ENCFF505XQX 212 bp overlap

ZBTB21 1 dataset

ChIP WTC11 ENCFF677ZYY 261 bp overlap

ZBTB7A 1 dataset

ChIP Ishikawa ENCFF191NFH 195 bp overlap

ZBTB7B 1 dataset

ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 58 bp overlap

ChIP HepG2 ENCFF106ELT 250 bp overlap

ZGPAT 1 dataset

ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 88 bp overlap

ZMYM2 2 datasets

ChIP HepG2 ENCFF575OMW 551 bp overlap

ChIP HepG2 ENCFF575OMW 429 bp overlap

ZMYM4 2 datasets

ChIP HepG2 ENCFF567SQY 438 bp overlap

ChIP HepG2 ENCFF567SQY 479 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 107 bp overlap

ZNF281 1 dataset

ChIP HepG2 ENCFF585QNU 167 bp overlap

ZNF316 1 dataset

ChIP K562 ENCFF838QCD 329 bp overlap

ZNF623 1 dataset

ChIP HEK293 ENCFF505YHP 232 bp overlap

ZNF776 1 dataset

ChIP HepG2 ENCFF009LSZ 241 bp overlap