chr16 : 74,495,325 74,495,916
591 bp 90 TFs 6 linked genes
This 591 bp open chromatin element is linked to 6 target genes and is bound by 90 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
GLG1 111.5 kb Distal Multiome
NPIPB15 117.7 kb Distal Multiome
RFWD3 171.3 kb Distal Multiome
ENSG00000259972 189.3 kb Distal Multiome
PSMD7 198.8 kb Distal Multiome
PSMD7-DT 198.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:74,490,325 – 74,500,916
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 456 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 258 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 591 bp overlap
BHLHE22 2 datasets
ChIP CAL-1 GSE43876.BHLHE22.CAL-1 179 bp overlap
ChIP CAL-1 GSE43876.BHLHE22.CAL-1 133 bp overlap
BRD4 8 datasets
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 197 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 458 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 421 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 440 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 522 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 573 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 377 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 115 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCSR372GIN.CBX5.GM12878 105 bp overlap
CDK9 6 datasets
ChIP MM1-S_DMSO GSE42355.CDK9.MM1-S_DMSO 251 bp overlap
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 195 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 502 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 315 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 339 bp overlap
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 202 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 391 bp overlap
Dmrt1 1 dataset
Motif DE_72h DE_72h-Dmrt1_MA1603.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 473 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF242HCG 332 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 216 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 429 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 166 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 470 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 361 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 591 bp overlap
ChIP DE DE-FOXA2-2 591 bp overlap
FOXS1 1 dataset
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 297 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 591 bp overlap
ChIP DE DE-GATA4-2 591 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 311 bp overlap
ChIP foregut GSE117136.GATA4.foregut 428 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 591 bp overlap
ChIP DE DE-GATA6-2 591 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 537 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 532 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 560 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 591 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 528 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 536 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 520 bp overlap
ChIP foregut GSE117136.GATA6.foregut 445 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 317 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 441 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 277 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF616FJX 494 bp overlap
ChIP GM12878 ENCFF753XDO 530 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF918AID 511 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 556 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 321 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 249 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 381 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 342 bp overlap
IRF4 3 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 112 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 115 bp overlap
ChIP U266 GSE142493.IRF4.U266 141 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 381 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 454 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 294 bp overlap
MED1 6 datasets
ChIP GM12878 GSE93080.MED1.GM12878 191 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 526 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 198 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 187 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 517 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 329 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 392 bp overlap
MEF2D 1 dataset
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 227 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 473 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 473 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 559 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 379 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 446 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 351 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 522 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 349 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 428 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 222 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 177 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 518 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 259 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 139 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 352 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 210 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 497 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 517 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 469 bp overlap
Prdm5 1 dataset
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
RBM22 1 dataset
ChIP K-562 ENCSR848AOP.RBM22.K-562 170 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 542 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 231 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 491 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 438 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 530 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 355 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 254 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 541 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 559 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 414 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 526 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 173 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 219 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 156 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 62 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 350 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 193 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 399 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 529 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 234 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 122 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 257 bp overlap
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 104 bp overlap
TCF4 4 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 287 bp overlap
ChIP CAL-1 GSE76147.TCF4.CAL-1 181 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 209 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 213 bp overlap
TCF7L2 1 dataset
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ZBTB33 1 dataset
ChIP GM12878 ENCFF818EFA 271 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 121 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZNF214 1 dataset
Motif DE_72h DE_72h-ZNF214_MA1975.2 13 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 411 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 364 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 173 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 521 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 340 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 150 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 139 bp overlap
ZNF558 1 dataset
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF596 1 dataset
ChIP HEK293 ENCFF854MGB 321 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 525 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 498 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 340 bp overlap