chr1 : 26,165,542 26,165,944
402 bp 77 TFs 2 linked genes
This 402 bp open chromatin element is linked to ZNF593 and FAM110D and is bound by 77 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZNF593 4.0 kb Proximal Proximity
FAM110D 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:26,160,542 – 26,170,944
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 120 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 124 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 402 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 171 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 73 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 101 bp overlap
BRD4 5 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 146 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 337 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 95 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 210 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 402 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 389 bp overlap
CTCF 1 dataset
ChIP RH4 GSE83726.CTCF.RH4 188 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 177 bp overlap
ChIP K562 ENCFF574LOW 162 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 358 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 193 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 176 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 402 bp overlap
ChIP DE DE-FOXA2-2 398 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF348SOM 357 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 268 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 171 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 180 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 303 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 145 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 402 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 351 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 402 bp overlap
ChIP DE DE-GATA4-2 388 bp overlap
ChIP foregut GSE117136.GATA4.foregut 402 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 392 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 402 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 402 bp overlap
ChIP DE DE-GATA6-2 386 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 387 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 360 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 394 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 402 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 402 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
ChIP foregut GSE117136.GATA6.foregut 402 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 402 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 249 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 208 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 193 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 320 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 231 bp overlap
ChIP K562 ENCFF968WBH 391 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 266 bp overlap
ChIP K562 ENCFF744ALD 343 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 297 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 343 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 321 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 383 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 236 bp overlap
ChIP K562 ENCFF348IBL 361 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 235 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 167 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF128TYE 348 bp overlap
ChIP K562 ENCFF133OLU 346 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 276 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 206 bp overlap
MAFF 1 dataset
ChIP K-562 ENCSR000EGI.MAFF.K-562 189 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 55 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 270 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 299 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 216 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 196 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 107 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 147 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 198 bp overlap
MYOG 2 datasets
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 227 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 210 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 236 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 208 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 200 bp overlap
NFKB1 2 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 60 bp overlap
ChIP L1236 GSE63736.NFKB1.L1236 214 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 120 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 305 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 153 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 402 bp overlap
ChIP HEK293 ENCFF016MNJ 256 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 357 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 277 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 157 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 256 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 214 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 198 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
RUNX1 6 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 382 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 332 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 332 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 382 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 215 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 137 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 402 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 371 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 252 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 179 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 230 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 223 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 113 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 233 bp overlap
ChIP K562 ENCFF059YCJ 354 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 212 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 228 bp overlap
SRF 1 dataset
ChIP GM12878 ENCSR000BMI.SRF.GM12878 99 bp overlap
SUZ12 1 dataset
ChIP NT2/D1 ENCFF574SXS 101 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 191 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 187 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 176 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 177 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 323 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 283 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 187 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 156 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 219 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 142 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 402 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 321 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 340 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 402 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 389 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 192 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 265 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 320 bp overlap