chr16 : 26,606,278 – 26,607,172
894 bp 110 TFs 1 linked gene
This 894 bp open chromatin element is linked to HS3ST4 and is bound by 110 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HS3ST4 914.7 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:26,601,278 – 26,612,172
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ASCL1 4 datasets
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1100.3 8 bp overlap
Motif DE_72h DE_72h-ASCL1_MA1631.2 9 bp overlap
Ascl2 2 datasets
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 1 dataset
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 141 bp overlap
BRD4 2 datasets
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 490 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 99 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 112 bp overlap
ChIP BLaER1 ENCFF335XTP 155 bp overlap
ChIP BLaER1 ENCFF335XTP 263 bp overlap
Crx 2 datasets
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPRX 2 datasets
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 2 datasets
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 222 bp overlap
DUXA 1 dataset
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
EOMES 2 datasets
Motif DE_72h DE_72h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 407 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 124 bp overlap
FERD3L 2 datasets
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
Motif DE_72h DE_72h-FERD3L_MA1485.1 14 bp overlap
FIGLA 3 datasets
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 883 bp overlap
ChIP DE DE-FOXA2-2 676 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 894 bp overlap
ChIP DE DE-GATA4-2 894 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 882 bp overlap
ChIP DE DE-GATA6-2 894 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 264 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 384 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 304 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 813 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 527 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 344 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 792 bp overlap
GSC 2 datasets
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HIC2 2 datasets
Motif DE_60h DE_60h-HIC2_MA0738.2 6 bp overlap
Motif DE_72h DE_72h-HIC2_MA0738.2 6 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 486 bp overlap
KLF11 1 dataset
Motif DE_72h DE_72h-KLF11_MA1512.2 10 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 258 bp overlap
LHX6 1 dataset
Motif DE_72h DE_72h-LHX6_MA0658.2 8 bp overlap
MEIS1 3 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
Motif DE_72h DE_72h-MGA_MA0801.1 8 bp overlap
MSANTD3 2 datasets
Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_72h DE_72h-MSANTD3_MA1523.2 7 bp overlap
MYB 2 datasets
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 66 bp overlap
NFIA 1 dataset
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
NHLH1 2 datasets
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap
NKX2-2 2 datasets
Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_72h DE_72h-NKX2-2_MA1645.2 8 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHE.NR3C1.A-549 163 bp overlap
NRL 2 datasets
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Motif DE_72h DE_72h-NRL_MA0842.3 12 bp overlap
Neurod2 1 dataset
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Nr2e3 2 datasets
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap
OTX1 2 datasets
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 78 bp overlap
PBX3 1 dataset
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PITX1 2 datasets
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 92 bp overlap
Prdm15 1 dataset
Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap
Prdm5 2 datasets
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RARA 2 datasets
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap
RBPJ 2 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
REST 3 datasets
Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap
Motif DE_72h DE_72h-REST_MA0138.3 20 bp overlap
Motif DE_72h DE_72h-REST_MA0138.3 20 bp overlap
RHOXF1 2 datasets
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RREB1 2 datasets
Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap
Motif DE_72h DE_72h-RREB1_MA0073.2 19 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 411 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 768 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 491 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 417 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 741 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 784 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 404 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 447 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 60 bp overlap
SNAI1 2 datasets
Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap
Motif DE_72h DE_72h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 2 datasets
Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 331 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 469 bp overlap
SP1 2 datasets
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 246 bp overlap
TBR1 1 dataset
Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_72h DE_72h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_72h DE_72h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_72h DE_72h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_72h DE_72h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_72h DE_72h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_72h DE_72h-TBX3_MA1566.3 9 bp overlap
TBX5 1 dataset
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap
Motif DE_72h DE_72h-TCF12_MA1648.2 7 bp overlap
TCF3 2 datasets
Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
Motif DE_72h DE_72h-TCF4_MA0830.3 8 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Tbx6 3 datasets
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
Motif DE_72h DE_72h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Thap11 2 datasets
Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap
Motif DE_72h DE_72h-Thap11_MA1573.2 14 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
ZBTB24 1 dataset
Motif DE_72h DE_72h-ZBTB24_MA2330.1 10 bp overlap
ZEB1 3 datasets
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZIC1 2 datasets
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
Motif DE_72h DE_72h-ZIC5_MA1584.2 15 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 184 bp overlap
ZNF317 1 dataset
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap
ZNF354A 1 dataset
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF416 2 datasets
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
Motif DE_72h DE_72h-ZNF416_MA1979.2 10 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF547 2 datasets
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
Motif DE_72h DE_72h-ZNF547_MA2334.1 13 bp overlap
ZNF582 2 datasets
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
Motif DE_72h DE_72h-ZNF582_MA1983.2 19 bp overlap
ZNF708 2 datasets
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
Motif DE_72h DE_72h-ZNF708_MA1730.2 9 bp overlap
ZNF75A 1 dataset
Motif DE_72h DE_72h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_72h DE_72h-ZNF75D_MA1601.2 12 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap
Zic1::Zic2 2 datasets
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_72h DE_72h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap
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