chr1 : 237,197,595 237,198,006
411 bp 87 TFs 0 linked genes
This 411 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:237,192,595 – 237,203,006
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 3 datasets
ChIP A-375 GSE116189.AR.A-375 131 bp overlap
ChIP LNCaP GSE80256.AR.LNCaP 221 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 212 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
ATF2 11 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 164 bp overlap
ChIP H1 ENCFF295GZO 351 bp overlap
ChIP H1 ENCFF295GZO 411 bp overlap
ChIP HEK293 ENCFF194VKZ 153 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 221 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 231 bp overlap
ChIP HepG2 ENCFF955VER 155 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 205 bp overlap
ChIP K562 ENCFF139ZZG 228 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 164 bp overlap
ATF3 4 datasets
Motif DE_12h DE_12h-ATF3_MA0605.3 10 bp overlap
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 113 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 109 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 174 bp overlap
ATF7 3 datasets
Motif DE_12h DE_12h-ATF7_MA0834.2 10 bp overlap
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 215 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 187 bp overlap
BRCA1 1 dataset
ChIP MCF-10A GSE40591.BRCA1.MCF-10A 153 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 368 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 237 bp overlap
BRD4 1 dataset
ChIP HEK293T GSE39579.BRD4.HEK293T 185 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CREB1 2 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 164 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 73 bp overlap
CREM 1 dataset
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 399 bp overlap
CTCF 23 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 263 bp overlap
ChIP H1 ENCFF764RHO 200 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 157 bp overlap
ChIP HEK293 ENCFF498RMM 223 bp overlap
ChIP HEK293 ENCFF821TIC 283 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 201 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 168 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 110 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 264 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 133 bp overlap
ChIP endodermal cell ENCFF471YCZ 361 bp overlap
ChIP endothelial cell ENCFF663LIE 411 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 282 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 176 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 192 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 310 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 270 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 185 bp overlap
ChIP heart left ventricle ENCFF185CKY 335 bp overlap
ChIP heart left ventricle ENCFF888ERQ 300 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 226 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 387 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 246 bp overlap
Creb5 1 dataset
Motif DE_12h DE_12h-Creb5_MA0840.2 10 bp overlap
DPF2 2 datasets
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 129 bp overlap
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 115 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 97 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 135 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 195 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 136 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 98 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 83 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 254 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 268 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 152 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 411 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 131 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 296 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 179 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 411 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
JUN 11 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 411 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 348 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 411 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 411 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 411 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 411 bp overlap
ChIP H1 ENCFF621PNP 212 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 411 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 411 bp overlap
ChIP WA01 ENCSR000ECA.JUN.WA01 113 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA1140.3 11 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
JUND 5 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
ChIP H1 ENCFF010YXS 201 bp overlap
ChIP H1 ENCFF468JZD 135 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 193 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 109 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 411 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 81 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 173 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 409 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 206 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 317 bp overlap
NELFE 1 dataset
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 127 bp overlap
NFIL3 2 datasets
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 192 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 236 bp overlap
ChIP HEK293 ENCFF145WQQ 107 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 165 bp overlap
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 215 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 63 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 148 bp overlap
SMARCC1 3 datasets
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 118 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 93 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 183 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 126 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 170 bp overlap
SOX4 1 dataset
ChIP MDA-MB-231 GSE104760.SOX4.MDA-MB-231 212 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 135 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 234 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 188 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 188 bp overlap
TEAD1 1 dataset
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 75 bp overlap
TEAD4 3 datasets
ChIP H1 ENCFF778PAX 185 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 185 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZEB1 3 datasets
ChIP HEK293 ENCFF007TAP 149 bp overlap
ChIP HEK293 ENCFF007TAP 381 bp overlap
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 122 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 260 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 202 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 121 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 141 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 170 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 296 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 156 bp overlap
ZNF274 1 dataset
ChIP HEK293 ENCFF742VRL 188 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 377 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 318 bp overlap
ZNF440 1 dataset
ChIP HEK293T GSE78099.ZNF440.HEK293T 195 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 401 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 279 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 189 bp overlap
ZSCAN21 3 datasets
ChIP HEK293 ENCFF582WUP 305 bp overlap
ChIP HEK293 ENCFF582WUP 346 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 411 bp overlap