chr13 : 106,986,114 106,986,664
550 bp 107 TFs 0 linked genes
This 550 bp open chromatin element has no linked target genes and is bound by 107 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:106,981,114 – 106,991,664
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
107 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 337 bp overlap
AR 5 datasets
ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 86 bp overlap
ChIP prostate GSE56288.AR.prostate 132 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 97 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 68 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 81 bp overlap
ARGFX 1 dataset
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 114 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 259 bp overlap
Arx 1 dataset
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 257 bp overlap
BRD4 4 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 352 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 525 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 351 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 438 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 172 bp overlap
CTCF 1 dataset
ChIP RH4 GSE83726.CTCF.RH4 162 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 176 bp overlap
ChIP BLaER1 ENCFF460KDD 383 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 169 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 206 bp overlap
EP300 2 datasets
ChIP neural cell ENCFF442QNK 388 bp overlap
ChIP neural cell ENCFF442QNK 470 bp overlap
FOSL2 1 dataset
ChIP hESC GSE69539.FOSL2.hESC 88 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 349 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 320 bp overlap
GABPA 1 dataset
ChIP liver ENCFF500III 52 bp overlap
GATA2 4 datasets
ChIP ESF GSE108408.GATA2.ESF 204 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 110 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 103 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 345 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 54 bp overlap
GATA4 2 datasets
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 98 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 169 bp overlap
GATA6 1 dataset
ChIP AGS GSE51705.GATA6.AGS 78 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Gfi1B 2 datasets
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
Motif ES_0h ES_0h-Gfi1B_MA0483.2 10 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 239 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 403 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 323 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 403 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 346 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 298 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 96 bp overlap
IRF2 2 datasets
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 200 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 370 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 435 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 347 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 401 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
KMT2A 1 dataset
ChIP RS4-11 GSE38403.KMT2A.RS4-11 235 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAX 4 datasets
ChIP WA01 ENCSR000EUP.MAX.WA01 192 bp overlap
ChIP liver ENCFF092GVW 267 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 312 bp overlap
ChIP liver ENCSR521IID.MAX.liver 194 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 374 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYC 2 datasets
ChIP HFF_OHT GSE65544.MYC.HFF_OHT 213 bp overlap
ChIP HFF_OHT_SHBPTF GSE65544.MYC.HFF_OHT_SHBPTF 174 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 337 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 301 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 128 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 317 bp overlap
Msgn1 2 datasets
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 379 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 365 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 278 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 477 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 386 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 320 bp overlap
ChIP hESC GSE18292.NANOG.hESC 149 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 349 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PAX3-FOXO1 3 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 228 bp overlap
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 374 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 338 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 105 bp overlap
ChIP fetal_testis GSE100639.PAX5.fetal_testis 91 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 279 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 118 bp overlap
PGR 3 datasets
ChIP endometrium_Midsecretory GSE132712.PGR.endometrium_Midsecretory 163 bp overlap
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 108 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 191 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 60 bp overlap
POLR2A 1 dataset
ChIP right lobe of liver ENCFF026NCK 468 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 384 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 394 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 357 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 238 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 246 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 279 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 193 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SMAD3 1 dataset
ChIP hESC GSE29422.SMAD3.hESC 208 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 271 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 225 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 342 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 232 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 297 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 213 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 290 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 75 bp overlap
ChIP hESC GSE18292.SOX2.hESC 94 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 301 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 178 bp overlap
ChIP WTC11 ENCFF688PEU 391 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 223 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 365 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 98 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 160 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 206 bp overlap
TP63 3 datasets
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 306 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 207 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 255 bp overlap
YY1 4 datasets
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 266 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 135 bp overlap
ChIP liver ENCFF515BWJ 92 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 191 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 311 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 71 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 295 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 290 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 396 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap