chr12 : 101,086,535 101,086,951
416 bp 84 TFs 0 linked genes
This 416 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:101,081,535 – 101,091,951
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AR 22 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 140 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 147 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 135 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 100 bp overlap
ChIP VCaP GSE148358.AR.VCaP 141 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 169 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 120 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 416 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 416 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 416 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 182 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 246 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 187 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 161 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 372 bp overlap
ChIP prostate GSE56288.AR.prostate 182 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 188 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 342 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 416 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 351 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 288 bp overlap
ChIP prostate_P5_T GSE130408.AR.prostate_P5_T 166 bp overlap
ARNTL 3 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 349 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 349 bp overlap
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 394 bp overlap
ASH2L 2 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 252 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 408 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 327 bp overlap
BRD4 5 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 176 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 376 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 401 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 214 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 211 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 416 bp overlap
CBFB 1 dataset
ChIP SaOS-2 GSE76937.CBFB.SaOS-2 183 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 155 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 258 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 254 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 174 bp overlap
EGR1 2 datasets
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 281 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 239 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 219 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 220 bp overlap
ERF 1 dataset
ChIP VCaP_DOX GSE98809.ERF.VCaP_DOX 124 bp overlap
ERG 14 datasets
ChIP VCaP GSE83650.ERG.VCaP 137 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 137 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 155 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 360 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 416 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 300 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 262 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 218 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 196 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 277 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 193 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 253 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 311 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 185 bp overlap
ESR1 4 datasets
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 254 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 253 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 224 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 248 bp overlap
ETV1 1 dataset
ChIP LNCaP GSE47120.ETV1.LNCaP 90 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 225 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 109 bp overlap
EZH2 2 datasets
ChIP GM23248 ENCFF506FWX 355 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 416 bp overlap
FEZF1 4 datasets
ChIP HEK293 ENCFF528YED 416 bp overlap
ChIP HEK293 ENCFF528YED 226 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 328 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 313 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 345 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 266 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 156 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 245 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 184 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 244 bp overlap
FOXA1 5 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 181 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 98 bp overlap
ChIP prostate_2030 GSE130408.FOXA1.prostate_2030 193 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 245 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 165 bp overlap
GABPA 4 datasets
ChIP SK-N-SH ENCSR000BTG.GABPA.SK-N-SH 104 bp overlap
ChIP VCaP GSE49091.GABPA.VCaP 332 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 227 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 221 bp overlap
GATA2 5 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 216 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 143 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 189 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 219 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 96 bp overlap
GATA3 3 datasets
ChIP MCF-7 ENCFF352QVM 322 bp overlap
ChIP SK-N-SH ENCFF040SSB 175 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 172 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 206 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 373 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 345 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 405 bp overlap
HOXB13 1 dataset
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 113 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 416 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 268 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 169 bp overlap
MED1 4 datasets
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 158 bp overlap
ChIP RH4 GSE83726.MED1.RH4 366 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 73 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 345 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 184 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 416 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 101 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 90 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 393 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 334 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 416 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 400 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 353 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 267 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 181 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 195 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 177 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 210 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 351 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 295 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 394 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 416 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 268 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 214 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 177 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 256 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 304 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 150 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 199 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 180 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 208 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 125 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 272 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 227 bp overlap
RFX5 2 datasets
ChIP MCF-7 ENCFF983ILY 371 bp overlap
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 225 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 416 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 320 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 388 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 395 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 286 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 404 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 234 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 179 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 247 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 167 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 188 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 416 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 254 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 232 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 192 bp overlap
SNAI2 5 datasets
ChIP RD GSE137168.SNAI2.RD 329 bp overlap
ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 372 bp overlap
ChIP SMS-CTR GSE137168.SNAI2.SMS-CTR 174 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 227 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 210 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 365 bp overlap
STAT1 1 dataset
ChIP FaDu_DMSO GSE78212.STAT1.FaDu_DMSO 320 bp overlap
STAT3 18 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 148 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 167 bp overlap
ChIP MCF-7 GSE152203.STAT3.MCF-7 271 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 294 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 325 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 400 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 255 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 214 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 284 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 207 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 299 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 416 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 290 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 293 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 407 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 406 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 416 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 416 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 413 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 114 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 178 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 159 bp overlap
TEAD4 9 datasets
ChIP BJ_fibroblast GSE114367.TEAD4.BJ_fibroblast 170 bp overlap
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 205 bp overlap
ChIP H1 ENCFF778PAX 200 bp overlap
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 198 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 213 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 253 bp overlap
ChIP MCF-7_Veh GSE125594.TEAD4.MCF-7_Veh 174 bp overlap
ChIP SK-N-SH ENCFF754TJT 245 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 213 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 150 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 359 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 371 bp overlap
ZNF143 2 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 217 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 253 bp overlap