chr12 : 98,520,559 98,520,845
286 bp 80 TFs 2 linked genes
This 286 bp open chromatin element is linked to TMPO-AS1 and TMPO and is bound by 80 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TMPO-AS1 4.3 kb Proximal Proximity
TMPO 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:98,515,559 – 98,525,845
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 286 bp overlap
ARID1A 6 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 150 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 286 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 116 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 236 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 164 bp overlap
ChIP MCF-7_estrogen GSE123284.ARID1A.MCF-7_estrogen 135 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 211 bp overlap
BRD4 2 datasets
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 127 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 210 bp overlap
CEBPA 2 datasets
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 227 bp overlap
ChIP liver ERP002306.CEBPA.liver 136 bp overlap
CEBPB 2 datasets
ChIP Ishikawa ENCFF010USJ 253 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 184 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF031ISE 208 bp overlap
ChIP BLaER1 ENCFF093OYK 286 bp overlap
ChIP BLaER1 ENCFF274GAT 286 bp overlap
ChIP BLaER1 ENCFF335XTP 286 bp overlap
ChIP BLaER1 ENCFF364PUR 286 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 286 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 238 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 239 bp overlap
ESR1 10 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 250 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 263 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 248 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 86 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 79 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 149 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 117 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 105 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 79 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 131 bp overlap
ESR1_Y537C 1 dataset
ChIP MCF-7_ESR1_mutant_LTED GSE100074.ESR1_Y537C.MCF-7_ESR1_mutant_LTED 215 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCFF485YIB 238 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 99 bp overlap
GATA3 12 datasets
ChIP MCF-7 ENCFF178GBS 261 bp overlap
ChIP MCF-7 ENCFF352QVM 117 bp overlap
ChIP MCF-7 ENCFF437NQS 231 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 242 bp overlap
ChIP MCF-7 GSE128445.GATA3.MCF-7 131 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 119 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 97 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 119 bp overlap
ChIP SK-N-SH ENCFF040SSB 222 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 125 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 91 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 126 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 152 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 96 bp overlap
GATA6 1 dataset
ChIP DE_D1 S09-DE-d1-GATA6-exp1 189 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 286 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 286 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 286 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 286 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 111 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF824TGK 103 bp overlap
ChIP GM12878 ENCFF824TGK 286 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 247 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 131 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 195 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 228 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 286 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 143 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 266 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 286 bp overlap
MEN1 4 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 286 bp overlap
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 243 bp overlap
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 84 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 157 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 286 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 286 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 125 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCFF340KVJ 133 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 263 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 286 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 286 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 83 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 286 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 129 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 220 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 209 bp overlap
ChIP HEK293 ENCFF145WQQ 286 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 141 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 286 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 265 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 286 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 286 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 258 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 131 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 252 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 256 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 122 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 276 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 232 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 277 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 286 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 81 bp overlap
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 133 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 102 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 286 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 286 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 112 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 286 bp overlap
ZBTB26 2 datasets
ChIP HEK293 ENCFF752TCU 286 bp overlap
ChIP HEK293 ENCFF752TCU 50 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 286 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 286 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 286 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 100 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 286 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 64 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 182 bp overlap
ZNF189 3 datasets
ChIP HEK293 ENCFF638TIB 230 bp overlap
ChIP HEK293 ENCFF638TIB 286 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 286 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 166 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 286 bp overlap
ZNF266 1 dataset
ChIP HEK293 ENCFF483FIW 72 bp overlap
ZNF324 2 datasets
ChIP HEK293 ENCFF062DPE 221 bp overlap
ChIP HEK293 ENCSR768HOH.ZNF324.HEK293 241 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 286 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 286 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 272 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 148 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 179 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 286 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 286 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 238 bp overlap
ZNF501 1 dataset
ChIP HepG2 ENCFF879XZR 226 bp overlap
ZNF558 2 datasets
ChIP HEK293 ENCFF994JWH 286 bp overlap
ChIP HEK293 ENCSR447ZTA.ZNF558.HEK293 286 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 232 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 256 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 286 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 99 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 286 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 89 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCFF582WUP 80 bp overlap
ZXDB 3 datasets
ChIP HEK293 ENCFF835SGA 286 bp overlap
ChIP HEK293 ENCFF835SGA 286 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 286 bp overlap