chr12 : 80,512,875 80,514,169
1,294 bp 102 TFs 0 linked genes
This 1.3 kb open chromatin element has no linked target genes and is bound by 102 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:80,507,875 – 80,519,169
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 235 bp overlap
BRD2 2 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 267 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 311 bp overlap
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 268 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 288 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 213 bp overlap
CTCF 78 datasets
ChIP BC-3 GSE135740.CTCF.BC-3 176 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_72h DE_72h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 97 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 195 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 206 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 78 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 135 bp overlap
ChIP GM12873 ENCFF711LOS 242 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 112 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 446 bp overlap
ChIP GM23338 ENCFF531QOI 198 bp overlap
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF772DML 116 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 281 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 222 bp overlap
ChIP H9 ENCFF152GTF 228 bp overlap
ChIP H9 ENCFF152GTF 461 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 124 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 213 bp overlap
ChIP HCT116 ENCFF003KHP 330 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 101 bp overlap
ChIP HFFc6 ENCFF005CJI 432 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 207 bp overlap
ChIP HepG2 ENCFF348BUL 166 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 159 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 106 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 98 bp overlap
ChIP KMS-11 ENCFF853JKX 544 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 195 bp overlap
ChIP NB4 ENCFF155DNY 203 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 290 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 309 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 517 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 105 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 518 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 217 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 397 bp overlap
ChIP Panc1 ENCFF056JQX 474 bp overlap
ChIP SK-N-SH ENCFF575DMG 264 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 243 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 144 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 74 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 422 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 123 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 149 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 164 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 168 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 169 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 178 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 116 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 114 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 160 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 260 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 262 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 118 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 137 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 270 bp overlap
ChIP endodermal cell ENCFF471YCZ 317 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 189 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 163 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 138 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 137 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 89 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 110 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 297 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
DPRX 1 dataset
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 213 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 117 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 410 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 435 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 314 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 337 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 129 bp overlap
FOXA1 1 dataset
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 462 bp overlap
ChIP DE DE-FOXA2-2 429 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 474 bp overlap
ChIP DE DE-GATA4-2 633 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 323 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 441 bp overlap
ChIP DE DE-GATA6-2 548 bp overlap
GFI1 1 dataset
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
Hand1 1 dataset
Motif DE_72h DE_72h-Hand1_MA2123.1 9 bp overlap
KLF1 1 dataset
Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF2 1 dataset
Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
Motif DE_72h DE_72h-KLF6_MA1517.2 9 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAX 2 datasets
ChIP SK-N-SH ENCFF285LXR 411 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 328 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 197 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 129 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 189 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 399 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 57 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 270 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 259 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 5 datasets
ChIP H1 ENCFF698EWO 221 bp overlap
ChIP H1 ENCFF967OJF 225 bp overlap
ChIP SK-N-SH GSE76815.RAD21.SK-N-SH 207 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 184 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 205 bp overlap
RELA 1 dataset
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 158 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SIN3A 3 datasets
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 181 bp overlap
ChIP SK-N-SH ENCFF931NFD 341 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 180 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 200 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 274 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 215 bp overlap
TAF1 2 datasets
ChIP SK-N-SH ENCFF630ERV 297 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 157 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 214 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 212 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
TP53 1 dataset
ChIP Calu-1_WT-COMB GSE128673.TP53.Calu-1_WT-COMB 237 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 196 bp overlap
VEZF1 2 datasets
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Motif ES_0h ES_0h-VEZF1_MA1578.2 6 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 327 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 225 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 280 bp overlap
ZIC1 1 dataset
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF574 1 dataset
Motif DE_72h DE_72h-ZNF574_MA1982.2 14 bp overlap
ZNF667 1 dataset
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF708 1 dataset
Motif DE_72h DE_72h-ZNF708_MA1730.2 9 bp overlap
Zic2 1 dataset
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap