chr12 : 54,385,548 54,386,072
524 bp 79 TFs 1 linked gene
This 524 bp open chromatin element is linked to ZNF385A and is bound by 79 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZNF385A at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:54,380,548 – 54,391,072
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 524 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 485 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 524 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 210 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 414 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 71 bp overlap
BRD2 3 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 307 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 217 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 329 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 184 bp overlap
BRD4 10 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 78 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 197 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 443 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 402 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 62 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 57 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 74 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 92 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 112 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 314 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 95 bp overlap
CHD2 3 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 250 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 136 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 220 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 104 bp overlap
CRX 3 datasets
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 264 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 330 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 316 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 461 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 372 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 432 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 396 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 246 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 67 bp overlap
ERG 2 datasets
ChIP SEM GSE117864.ERG.SEM 164 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 58 bp overlap
ESR1 3 datasets
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 274 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 449 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 134 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 68 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 524 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 204 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 145 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 110 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 268 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 472 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 112 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 259 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 524 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 104 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 140 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 108 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 524 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 394 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 274 bp overlap
ChIP H1 ENCFF078LED 510 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 245 bp overlap
MAX 1 dataset
ChIP P493-6 GSE36354.MAX.P493-6 77 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 353 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 471 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 271 bp overlap
MED1 7 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 395 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 389 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 179 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 87 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 251 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 209 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 139 bp overlap
MEF2D 2 datasets
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 450 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 356 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 63 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 110 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 228 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 101 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 314 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 79 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 86 bp overlap
NIPBL 1 dataset
ChIP hESC GSE64758.NIPBL.hESC 215 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 431 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 273 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 182 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 171 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 448 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 264 bp overlap
POLR2A 10 datasets
ChIP GM12878 ENCFF263VRI 116 bp overlap
ChIP GM12878 ENCFF412KAE 202 bp overlap
ChIP GM12878 ENCFF412KAE 402 bp overlap
ChIP GM12892 ENCFF245LYF 170 bp overlap
ChIP GM18526 ENCFF599EPS 145 bp overlap
ChIP GM18951 ENCFF079KKO 151 bp overlap
ChIP GM19099 ENCFF726IBN 144 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 272 bp overlap
ChIP spleen ENCFF446ZGT 64 bp overlap
ChIP vagina ENCFF384GAB 480 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 330 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 466 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 236 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 83 bp overlap
PTBP1 2 datasets
ChIP K-562 GSE120104.PTBP1.K-562 57 bp overlap
ChIP K-562 ENCSR948KMB.PTBP1.K-562 55 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 289 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 145 bp overlap
RBFOX2 3 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 249 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 253 bp overlap
ChIP K562 ENCFF196WTG 443 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 53 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 424 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 524 bp overlap
RXRA 3 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 243 bp overlap
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 282 bp overlap
ChIP JMSU-1_RXRA-S427F GSE107734.RXRA.JMSU-1_RXRA-S427F 226 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 54 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 146 bp overlap
SMAD2-3 2 datasets
ChIP HUVEC-C_PBS GSE134556.SMAD2-3.HUVEC-C_PBS 524 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 353 bp overlap
SMAD5 1 dataset
ChIP K562 ENCFF941FJJ 516 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 279 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 382 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 206 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 62 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 181 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 111 bp overlap
SP1 2 datasets
ChIP HEK293 GSE76494.SP1.HEK293 208 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 371 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 181 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 287 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 524 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 369 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 64 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 226 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 203 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 251 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 88 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 297 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 119 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 88 bp overlap