chr11 : 95,232,733 – 95,233,136
403 bp 73 TFs 2 linked genes
This 403 bp open chromatin element is linked to LNCRNA-IUR and SESN3 and is bound by 73 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LNCRNA-IUR 1.5 kb Proximal Proximity
SESN3 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:95,227,733 – 95,238,136
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ATF2 3 datasets
ChIP GM12878 ENCFF521LQJ 56 bp overlap
ChIP GM12878 ENCFF521LQJ 361 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 73 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 78 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 376 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 271 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 134 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 227 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 130 bp overlap
BRD4 2 datasets
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 85 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 93 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 241 bp overlap
ChIP GM12878 ENCFF870CVH 308 bp overlap
CTCF 23 datasets
ChIP B cell ENCFF506FKC 245 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 90 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 138 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 97 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 102 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 136 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 139 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 83 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 144 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 191 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 168 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 287 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 92 bp overlap
ChIP adrenal gland ENCFF886WNR 228 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 103 bp overlap
ChIP body of pancreas ENCFF269EDN 118 bp overlap
ChIP brain ENCFF685VRG 125 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 117 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 136 bp overlap
ChIP hepatocyte ENCFF263BLJ 188 bp overlap
ChIP spleen ENCFF678RAG 175 bp overlap
ChIP tibial nerve ENCFF665IWH 190 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 54 bp overlap
CUX1 1 dataset
ChIP GM12878 ENCFF064TOM 51 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 98 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 142 bp overlap
EZH2 3 datasets
ChIP H1 ENCFF232NZA 109 bp overlap
ChIP H1 ENCFF232NZA 310 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 164 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 400 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 218 bp overlap
FOXP1 1 dataset
ChIP U2932 ERP010999.FOXP1.U2932 193 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 161 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 146 bp overlap
ChIP GM12878 ENCFF824TGK 114 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 129 bp overlap
ChIP GM12878 ENCFF918AID 108 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 80 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 117 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 154 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 212 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 73 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 243 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 283 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 177 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 130 bp overlap
ChIP NB4 ENCFF966MWB 142 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 78 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 353 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 124 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 257 bp overlap
MTA3 3 datasets
ChIP GM12878 ENCFF681QPL 368 bp overlap
ChIP GM12878 ENCFF681QPL 403 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 183 bp overlap
MYB 4 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 162 bp overlap
ChIP GM12878 ENCSR819ATC.MYB.GM12878 174 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 326 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 92 bp overlap
MYC 1 dataset
ChIP NB4 ENCFF142PRP 120 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 403 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 387 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 369 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 403 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 317 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCFF023CAZ 403 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 348 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 403 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 152 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 116 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 86 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 140 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 87 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 338 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 211 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 287 bp overlap
PML 1 dataset
ChIP GM12878 ENCFF160JQZ 403 bp overlap
POLR2A 3 datasets
ChIP GM12892 ENCFF245LYF 67 bp overlap
ChIP GM18951 ENCFF079KKO 90 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 62 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 403 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 201 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 350 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 165 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 403 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 258 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 249 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 291 bp overlap
RAD21 4 datasets
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 193 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 90 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 106 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 87 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 181 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 255 bp overlap
RNF2 4 datasets
ChIP Hep-G2 ENCSR523XCR.RNF2.Hep-G2 87 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 403 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 403 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 260 bp overlap
RUNX1 2 datasets
ChIP NALM-6 GSE126300.RUNX1.NALM-6 155 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 139 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 231 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 112 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 295 bp overlap
SMARCA4 3 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 248 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 156 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 113 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 195 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 157 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 51 bp overlap
STAT3 1 dataset
ChIP B-cell GSE123398.STAT3.B-cell 205 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 403 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 191 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 182 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 124 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 344 bp overlap
TCF12 3 datasets
ChIP GM12878 ENCFF433DMU 211 bp overlap
ChIP GM12878 ENCFF506WWB 236 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 190 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 155 bp overlap
TCF7 1 dataset
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 169 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 280 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 343 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 79 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 114 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 98 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 232 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 73 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCFF282RUS 145 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 160 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 202 bp overlap
ZSCAN29 2 datasets
ChIP GM12878 ENCFF983OKU 285 bp overlap
ChIP GM12878 ENCSR412YGM.ZSCAN29.GM12878 191 bp overlap
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