chr1 : 200,873,127 200,873,552
425 bp 93 TFs 0 linked genes
This 425 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:200,868,127 – 200,878,552
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AR 5 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 151 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 189 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 69 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 155 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 425 bp overlap
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 419 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 425 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 223 bp overlap
BRD4 13 datasets
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 63 bp overlap
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 207 bp overlap
ChIP BCBL-1_TREx-F3H3-K-Rt GSE103395.BRD4.BCBL-1_TREx-F3H3-K-Rt 363 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 94 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 425 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 425 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 281 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 343 bp overlap
ChIP MCF-7 GSE55921.BRD4.MCF-7 148 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 312 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 425 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 425 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 425 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 425 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 174 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 347 bp overlap
ChIP hESC GSE133412.CBX7.hESC 357 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 106 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 293 bp overlap
CREB1 1 dataset
ChIP MDA-MB-134-VI GSE109103.CREB1.MDA-MB-134-VI 107 bp overlap
CTCF 13 datasets
ChIP 22Rv1 ENCFF466OXN 425 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 320 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 161 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 425 bp overlap
ChIP RWPE2 ENCFF911IEE 425 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 313 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 425 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 408 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 235 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 64 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 103 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 190 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 366 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 425 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 425 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 302 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 425 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 217 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 75 bp overlap
ERG 6 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 425 bp overlap
ChIP K-562 GSE23730.ERG.K-562 336 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 315 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 267 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 236 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 156 bp overlap
ESR1 12 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 327 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 193 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 110 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 170 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 113 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 72 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 425 bp overlap
ChIP MCF-7_Tamoxifen GSE115607.ESR1.MCF-7_Tamoxifen 86 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 225 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 425 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 425 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 249 bp overlap
EZH2 16 datasets
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 425 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 425 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 425 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 425 bp overlap
ChIP astrocyte ENCFF365JTP 425 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 425 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 425 bp overlap
ChIP fibroblast of lung ENCFF479BAW 315 bp overlap
ChIP fibroblast of lung ENCFF479BAW 74 bp overlap
ChIP hESC GSE113817.EZH2.hESC 209 bp overlap
ChIP keratinocyte ENCFF070STK 397 bp overlap
ChIP keratinocyte ENCFF070STK 185 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 425 bp overlap
ChIP myotube ENCFF857GWB 93 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 425 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 225 bp overlap
FLI1 2 datasets
ChIP UAE GSE23730.FLI1.UAE 83 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 102 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 425 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 197 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 300 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 226 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 68 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 257 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 207 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 261 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 271 bp overlap
KDM4A 3 datasets
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 287 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 363 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 417 bp overlap
KDM5B 3 datasets
ChIP MCF-7 GSE46055.KDM5B.MCF-7 172 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 166 bp overlap
ChIP WA01 ENCSR000AUR.KDM5B.WA01 146 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 322 bp overlap
KMT2A 2 datasets
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 307 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 120 bp overlap
MAF1 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 108 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 208 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 192 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 119 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 114 bp overlap
ChIP P493-6_0HR GSE125863.MYC.P493-6_0HR 296 bp overlap
MYCN 4 datasets
ChIP Kelly GSE94822.MYCN.Kelly 86 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 159 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 153 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 136 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 199 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 378 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 352 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 152 bp overlap
NFYB 1 dataset
ChIP WTC11 ENCFF751ZTQ 391 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 425 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 260 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 359 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 118 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 60 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 112 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 419 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 391 bp overlap
POLR2A 4 datasets
ChIP GM12892 ENCFF506PGQ 341 bp overlap
ChIP prostate gland ENCFF882MXU 182 bp overlap
ChIP prostate gland ENCFF882MXU 345 bp overlap
ChIP spleen ENCFF706IUS 58 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 210 bp overlap
POU5F1 6 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 206 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 425 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 391 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 403 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 175 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 62 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 425 bp overlap
RAD21 1 dataset
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 167 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 85 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 163 bp overlap
REST 2 datasets
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 186 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 190 bp overlap
RNF2 3 datasets
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 208 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 269 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 323 bp overlap
RUNX1 2 datasets
ChIP AML GSE111821.RUNX1.AML 186 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 210 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 317 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 213 bp overlap
SIRT6 2 datasets
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 209 bp overlap
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 87 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 106 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 52 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 350 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 151 bp overlap
ChIP MCF-7_shJUN GSE128445.SMARCA4.MCF-7_shJUN 261 bp overlap
SMC1A 3 datasets
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 400 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 274 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 202 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 222 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 425 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 425 bp overlap
STAT3 2 datasets
ChIP WA01 ERP004237.STAT3.WA01 196 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 51 bp overlap
SUZ12 6 datasets
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 260 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 329 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 332 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 353 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 425 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 383 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 170 bp overlap
TCF12 1 dataset
ChIP ME-1 GSE46044.TCF12.ME-1 213 bp overlap
TCF7 2 datasets
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 300 bp overlap
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 382 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 425 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 78 bp overlap
TP63 2 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 146 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 272 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 425 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 425 bp overlap
YBX1 1 dataset
ChIP HEL GSE146717.YBX1.HEL 212 bp overlap
YY1 1 dataset
ChIP GM12892 ENCSR000BLT.YY1.GM12892 205 bp overlap
ZBTB33 2 datasets
ChIP K562 ENCFF427SDV 425 bp overlap
ChIP WTC11 ENCFF048CFR 124 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 425 bp overlap
ZFX 2 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 425 bp overlap
ChIP PrEC GSE102616.ZFX.PrEC 205 bp overlap
ZFY 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFY.HEK293T_22Rv1 425 bp overlap
ZNF2 1 dataset
ChIP HEK293T GSE78099.ZNF2.HEK293T 348 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 145 bp overlap
ZNF57 1 dataset
ChIP BG01V GSE97403.ZNF57.BG01V 227 bp overlap
ZNF711 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZNF711.HEK293T_22Rv1 425 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap