chr11 : 7,444,626 7,445,182
556 bp 106 TFs 0 linked genes
This 556 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:7,439,626 – 7,450,182
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP SW480 GSE110473.BRD4.SW480 385 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 270 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 357 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 166 bp overlap
Bcl11B 4 datasets
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap
CBFB 1 dataset
ChIP SaOS-2 GSE76937.CBFB.SaOS-2 278 bp overlap
CTCF 2 datasets
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 223 bp overlap
Crx 3 datasets
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPRX 3 datasets
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
Dmbx1 3 datasets
Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
E2F6 3 datasets
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
Motif DE_48h DE_48h-E2F6_MA0471.3 8 bp overlap
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
EBF1 3 datasets
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 190 bp overlap
EBF3 2 datasets
Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap
Motif DE_60h DE_60h-EBF3_MA1637.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 394 bp overlap
ESRRA 1 dataset
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
EZH2 2 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 372 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 102 bp overlap
Ebf2 2 datasets
Motif DE_36h DE_36h-Ebf2_MA1604.2 9 bp overlap
Motif DE_60h DE_60h-Ebf2_MA1604.2 9 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 417 bp overlap
ChIP DE DE-FOXA2-2 547 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 468 bp overlap
ChIP DE DE-GATA4-2 556 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 450 bp overlap
ChIP DE DE-GATA6-2 556 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 417 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 478 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 491 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 507 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 495 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 468 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 498 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 358 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 223 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 514 bp overlap
GSC 3 datasets
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HNF4A 7 datasets
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_72h DE_72h-HNF4A_MA0114.5 9 bp overlap
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 271 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 252 bp overlap
HNF4G 5 datasets
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Motif DE_72h DE_72h-HNF4G_MA0484.3 9 bp overlap
Hnf1A 3 datasets
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 5 datasets
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 328 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 292 bp overlap
IRF7 1 dataset
Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap
ISL2 1 dataset
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Lef1 4 datasets
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
MED1 2 datasets
ChIP adipocyte GSE140782.MED1.adipocyte 186 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 311 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 208 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_36h DE_36h-MEIS3_MA0775.2 7 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 212 bp overlap
NFATC3 3 datasets
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
NFATC4 3 datasets
Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap
Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap
Motif DE_72h DE_72h-NFATC4_MA1525.3 9 bp overlap
NFIA 2 datasets
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIC 2 datasets
Motif DE_36h DE_36h-NFIC_MA0161.3 7 bp overlap
Motif DE_60h DE_60h-NFIC_MA0161.3 7 bp overlap
NFIX 2 datasets
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
NKX2-3 1 dataset
Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap
NR2C1 3 datasets
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 3 datasets
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
NR2F1 3 datasets
Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap
Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap
Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap
Nfat5 3 datasets
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 3 datasets
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
Nkx3-1 1 dataset
Motif DE_36h DE_36h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap
Nr1H2 3 datasets
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 3 datasets
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 3 datasets
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
Nr5A2 1 dataset
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
OTX1 3 datasets
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PBX1 5 datasets
Motif DE_36h DE_36h-PBX1_MA0070.2 9 bp overlap
Motif DE_48h DE_48h-PBX1_MA0070.2 9 bp overlap
Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap
Motif DE_72h DE_72h-PBX1_MA0070.2 9 bp overlap
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 333 bp overlap
PITX1 3 datasets
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 3 datasets
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 3 datasets
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 225 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELA 4 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 237 bp overlap
RHOXF1 3 datasets
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RORA 3 datasets
Motif DE_36h DE_36h-RORA_MA0071.1 10 bp overlap
Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap
Motif DE_72h DE_72h-RORA_MA0071.1 10 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 210 bp overlap
RUNX2 2 datasets
Motif DE_36h DE_36h-RUNX2_MA0511.2 9 bp overlap
ChIP SaOS-2 GSE76937.RUNX2.SaOS-2 209 bp overlap
RUNX3 1 dataset
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
Runx1 1 dataset
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 241 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 556 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 455 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 409 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 436 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 325 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 496 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 556 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 305 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 341 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Six3 3 datasets
Motif DE_36h DE_36h-Six3_MA0631.2 11 bp overlap
Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap
Motif DE_72h DE_72h-Six3_MA0631.2 11 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 330 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 66 bp overlap
TCF7 4 datasets
Motif DE_36h DE_36h-TCF7_MA0769.3 7 bp overlap
Motif DE_36h DE_36h-TCF7_MA0769.3 7 bp overlap
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
Motif DE_72h DE_72h-TCF7_MA0769.3 7 bp overlap
TCF7L1 3 datasets
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 8 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 207 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 304 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 243 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 249 bp overlap
ChIP Panc1 ENCFF829HHL 414 bp overlap
TFAP2B 2 datasets
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_60h DE_60h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 2 datasets
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0524.3 11 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 243 bp overlap
TP53 3 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 269 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 81 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 306 bp overlap
ZBTB17 4 datasets
Motif DE_36h DE_36h-ZBTB17_MA2102.1 8 bp overlap
Motif DE_48h DE_48h-ZBTB17_MA2102.1 8 bp overlap
Motif DE_60h DE_60h-ZBTB17_MA2102.1 8 bp overlap
Motif DE_72h DE_72h-ZBTB17_MA2102.1 8 bp overlap
ZBTB24 1 dataset
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 221 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 428 bp overlap
ZNF418 3 datasets
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
Motif DE_72h DE_72h-ZNF418_MA1980.1 15 bp overlap
ZNF547 3 datasets
Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
Motif DE_72h DE_72h-ZNF547_MA2334.1 13 bp overlap
ZNF549 1 dataset
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF682 3 datasets
Motif DE_36h DE_36h-ZNF682_MA1599.2 11 bp overlap
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap
Zfp809 2 datasets
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Zic1::Zic2 2 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
Znf423 2 datasets
Motif DE_36h DE_36h-Znf423_MA0116.1 15 bp overlap
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap