chr10 : 116,324,321 – 116,325,535
1,214 bp 94 TFs 1 linked gene
This 1.2 kb open chromatin element is linked to CCDC172 and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CCDC172 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:116,319,321 – 116,330,535
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 768 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 1092 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP H1 ENCFF295GZO 571 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 160 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 1 dataset
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
BCL11A 2 datasets
Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap
Motif ES_0h ES_0h-BCL11A_MA2324.1 7 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 482 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 533 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 153 bp overlap
BRD3 2 datasets
ChIP H-1 GSE126661.BRD3.H-1 229 bp overlap
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 304 bp overlap
BRD4 4 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 185 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 204 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 277 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BRF1 2 datasets
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 388 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 179 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 471 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 229 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 236 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 142 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 286 bp overlap
CTCF 4 datasets
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM23338 ENCFF772DML 165 bp overlap
ChIP H1 ENCFF764RHO 220 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 117 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 271 bp overlap
ChIP BLaER1 ENCFF274GAT 267 bp overlap
ChIP BLaER1 ENCFF460KDD 421 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 238 bp overlap
E2F6 5 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 539 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 198 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 137 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 302 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ESR1 4 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 310 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 484 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 283 bp overlap
EZH2 6 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 507 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 454 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 936 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 272 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 184 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 209 bp overlap
EZH2_phosphoT487 1 dataset
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 593 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
Foxn1 1 dataset
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
GLIS2 2 datasets
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
Motif ES_0h ES_0h-GLIS2_MA0736.1 14 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif ES_0h ES_0h-GLIS3_MA0737.1 14 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 547 bp overlap
HSF1 1 dataset
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 226 bp overlap
INSM1 2 datasets
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 350 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 213 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 279 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 248 bp overlap
JUN::JUNB 1 dataset
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 208 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 183 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 221 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 155 bp overlap
ChIP WTC11 ENCFF223QFY 585 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Msgn1 2 datasets
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 298 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 163 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 755 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 510 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 520 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 639 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 509 bp overlap
ChIP hESC GSE18292.NANOG.hESC 227 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 182 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap
PCGF1 2 datasets
ChIP WA01 GSE104690.PCGF1.WA01 190 bp overlap
ChIP WA01 GSE104690.PCGF1.WA01 309 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 304 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU5F1 13 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 221 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 1166 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 410 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 272 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 343 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 181 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 276 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 455 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 204 bp overlap
RAD21 5 datasets
ChIP H1 ENCFF698EWO 181 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 131 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 160 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 133 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 118 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 279 bp overlap
REL 2 datasets
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
Motif ES_0h ES_0h-REL_MA0101.1 10 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif ES_0h ES_0h-RELA_MA0107.1 10 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 400 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 1214 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 254 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 503 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 432 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 221 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 307 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 280 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 402 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 545 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 94 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 425 bp overlap
SOX8 2 datasets
ChIP RH4 GSE116344.SOX8.RH4 210 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 232 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 355 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 485 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 122 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 165 bp overlap
TBP 5 datasets
ChIP hESC GSE122298.TBP.hESC 411 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 127 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 240 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 186 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 151 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
TP53 3 datasets
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 386 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 278 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 118 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 312 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 143 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 283 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 477 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF669 1 dataset
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
ZNF675 2 datasets
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
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