chr10 : 84,567,154 84,568,509
1,355 bp 88 TFs 2 linked genes
This 1.4 kb open chromatin element is linked to RPS3AP5 and CCSER2 and is bound by 88 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
RPS3AP5 6.7 kb Proximal Proximity
CCSER2 239.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:84,562,154 – 84,573,509
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 394 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 173 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 371 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 255 bp overlap
CREB1 2 datasets
ChIP MCF-7 ENCFF867SAS 417 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 241 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 281 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 215 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 315 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 321 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 326 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 295 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 277 bp overlap
E2F7 1 dataset
Motif DE_72h DE_72h-E2F7_MA0758.1 14 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 205 bp overlap
ChIP hESC GSE26097.EOMES.hESC 545 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 604 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 152 bp overlap
EZH2 5 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 446 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 335 bp overlap
ChIP neural progenitor cell ENCFF018MKA 335 bp overlap
ChIP neural progenitor cell ENCFF018MKA 769 bp overlap
ChIP neural progenitor cell ENCFF018MKA 845 bp overlap
Elf5 4 datasets
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 252 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 685 bp overlap
ChIP DE DE-FOXA2-2 708 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GATA1 2 datasets
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA2 4 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 10 datasets
ChIP DE DE-GATA4-1 1122 bp overlap
ChIP DE DE-GATA4-2 1333 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 542 bp overlap
ChIP foregut GSE117136.GATA4.foregut 442 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 470 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 331 bp overlap
GATA5 4 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 19 datasets
ChIP DE DE-GATA6-1 211 bp overlap
ChIP DE DE-GATA6-1 788 bp overlap
ChIP DE DE-GATA6-2 1181 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1087 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1011 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 926 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1355 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1034 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1164 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 759 bp overlap
ChIP foregut GSE117136.GATA6.foregut 467 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 530 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 425 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 270 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 238 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 115 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 407 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 264 bp overlap
HNF4A 3 datasets
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_72h DE_72h-HNF4A_MA0114.5 9 bp overlap
HNF4G 3 datasets
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Motif DE_72h DE_72h-HNF4G_MA0484.3 9 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 270 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 352 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 677 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 904 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 631 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 673 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 224 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 246 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 192 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 301 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 268 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 299 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 920 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 755 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 184 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 1127 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 881 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 935 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
ChIP hESC GSE18292.NANOG.hESC 434 bp overlap
ChIP hESC GSE20650.NANOG.hESC 271 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 275 bp overlap
ChIP D283-Med GSE92582.NEUROD1.D283-Med 356 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 236 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 219 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 233 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 55 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 174 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 332 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 167 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 282 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 10 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 246 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 663 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 380 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 430 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 217 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 518 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 825 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 203 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 308 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 188 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 236 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 203 bp overlap
REL 4 datasets
Motif DE_36h DE_36h-REL_MA0101.1 10 bp overlap
Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
Motif DE_72h DE_72h-REL_MA0101.1 10 bp overlap
RELA 4 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 293 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 292 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1103 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 697 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 782 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 619 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 565 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 349 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 992 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1128 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 380 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 653 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 475 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 792 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 435 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 552 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 534 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 294 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 798 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 205 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 441 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 815 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 210 bp overlap
ChIP hESC GSE18292.SOX2.hESC 250 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 348 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 359 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 411 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 219 bp overlap
Sox6 2 datasets
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 551 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCFF513JQN 505 bp overlap
TEAD1 4 datasets
Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap
Motif DE_48h DE_48h-TEAD1_MA0090.4 9 bp overlap
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD4 4 datasets
Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap
Motif DE_48h DE_48h-TEAD4_MA0809.3 8 bp overlap
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 197 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 320 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 148 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 453 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 128 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 232 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 143 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 230 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 384 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 391 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 315 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 416 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 320 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 194 bp overlap
ZNF530 2 datasets
ChIP HEK293 ENCFF931DWM 217 bp overlap
ChIP HEK293 ENCSR701RXW.ZNF530.HEK293 87 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 182 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 296 bp overlap
ZNF680 2 datasets
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
Motif DE_72h DE_72h-ZNF680_MA1729.2 11 bp overlap
ZNF768 4 datasets
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
ZNF816 3 datasets
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Motif DE_72h DE_72h-ZNF816_MA1719.2 15 bp overlap
ZNF843 3 datasets
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 272 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 525 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 297 bp overlap