chr9 : 129,179,155 129,179,440
285 bp 81 TFs 1 linked gene
This 285 bp open chromatin element is linked to IER5L and is bound by 81 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
IER5L 894 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:129,174,155 – 129,184,440
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 88 bp overlap
ARID4B 2 datasets
ChIP K562 ENCFF791HBV 69 bp overlap
ChIP WTC11 ENCFF441HDK 127 bp overlap
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 75 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 166 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 140 bp overlap
BRD4 4 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 81 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 285 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 145 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 132 bp overlap
CDK9 1 dataset
ChIP BT-474 ERP010664.CDK9.BT-474 161 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 70 bp overlap
CREB1 2 datasets
ChIP WA01 ENCSR000BSN.CREB1.WA01 140 bp overlap
ChIP WTC11 ENCFF297VCI 177 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 260 bp overlap
CTCF 5 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 157 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 258 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 251 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 89 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 285 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 50 bp overlap
ChIP BLaER1 ENCFF335XTP 89 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 79 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 75 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 106 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 150 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 94 bp overlap
ESR1 8 datasets
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 218 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 182 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 102 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 75 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 189 bp overlap
ChIP MCF-7_estradiol-aldosterone_4h GSE99626.ESR1.MCF-7_estradiol-aldosterone_4h 233 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 215 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 88 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 285 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 285 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 189 bp overlap
EZH2 4 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 97 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 95 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 94 bp overlap
ChIP neural progenitor cell ENCFF472NFV 51 bp overlap
FOXA1 10 datasets
ChIP LS180 GSE140533.FOXA1.LS180 175 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 285 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 243 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 210 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 171 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 277 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 247 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 186 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 139 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 233 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 183 bp overlap
ChIP DE DE-FOXA2-1 285 bp overlap
ChIP DE DE-FOXA2-2 285 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 227 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 111 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 215 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 114 bp overlap
GATA4 3 datasets
ChIP foregut GSE117136.GATA4.foregut 198 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 252 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 285 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 158 bp overlap
ChIP DE DE-GATA6-2 117 bp overlap
ChIP foregut GSE117136.GATA6.foregut 274 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 181 bp overlap
HDAC1 1 dataset
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_4-OHT_clone14 175 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR000AQG.HDAC2.K-562 152 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 110 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 252 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 285 bp overlap
ChIP K562 ENCFF348IBL 207 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 63 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 172 bp overlap
JUN 3 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 163 bp overlap
ChIP H1 ENCFF621PNP 77 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 171 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 83 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 184 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 160 bp overlap
MAX 2 datasets
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 71 bp overlap
ChIP WTC11 ENCFF223QFY 123 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 76 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 285 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 189 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 117 bp overlap
ChIP H1 ENCFF747ZPQ 81 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 278 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 186 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 130 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 79 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 220 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 138 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 196 bp overlap
NIPBL 6 datasets
ChIP WA09 GSE105028.NIPBL.WA09 85 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 174 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 89 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 90 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 223 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 111 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 117 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 285 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 205 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 283 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 118 bp overlap
ChIP H1 ENCFF833NJP 100 bp overlap
ChIP MCF-7 ENCFF164XWP 199 bp overlap
ChIP MCF-7 ENCFF411WCU 138 bp overlap
POU5F1 14 datasets
ChIP BG03 GSE21614.POU5F1.BG03 155 bp overlap
ChIP GM23338 ENCFF333SNB 119 bp overlap
ChIP H1 ENCFF698ZAP 106 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 221 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 185 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 276 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 80 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 95 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 110 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 188 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 200 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 285 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 133 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 75 bp overlap
RAD21 4 datasets
ChIP MCF-7 ERP000209.RAD21.MCF-7 166 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 267 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 235 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 149 bp overlap
RNF2 1 dataset
ChIP HUES-64 GSE104059.RNF2.HUES-64 55 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 147 bp overlap
ChIP H1 ENCFF042ZSL 285 bp overlap
ChIP H1 ENCFF896IJG 263 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 212 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 177 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 225 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 212 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 156 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 4 datasets
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 166 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 150 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 133 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 131 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 138 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 98 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 81 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 145 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 102 bp overlap
ChIP hESC GSE69479.SOX2.hESC 87 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 151 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 105 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 209 bp overlap
ChIP WTC11 ENCFF688PEU 272 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 285 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 248 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 118 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 156 bp overlap
SREBF1 2 datasets
ChIP MCF-7 ENCFF254QOR 113 bp overlap
ChIP MCF-7 ENCSR197DJH.SREBF1.MCF-7 232 bp overlap
SRF 2 datasets
ChIP Hep-G2 ENCSR000BLV.SRF.Hep-G2 54 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 66 bp overlap
STAG1 3 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 236 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 285 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 227 bp overlap
STAT3 4 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 176 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 122 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 213 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 164 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 140 bp overlap
SUZ12 2 datasets
ChIP hiPSC GSE124903.SUZ12.hiPSC 133 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 213 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 240 bp overlap
ChIP hESC GSE122298.TBP.hESC 118 bp overlap
TCF12 3 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 123 bp overlap
ChIP H1 ENCFF203EBH 70 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 271 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 229 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 126 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 260 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 87 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 108 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 131 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 200 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 155 bp overlap