chr9 : 18,504,782 – 18,505,025
243 bp 85 TFs 0 linked genes
This 243 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:18,499,782 – 18,510,025
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AR 31 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 243 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 50 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 76 bp overlap
ChIP VCaP GSE83650.AR.VCaP 236 bp overlap
ChIP VCaP GSE98809.AR.VCaP 236 bp overlap
ChIP VCaP GSE148358.AR.VCaP 133 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 97 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 159 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 157 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 206 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 99 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 243 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 180 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 193 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 50 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 109 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 97 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 194 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 243 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 231 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 180 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 179 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 124 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 61 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 138 bp overlap
ChIP prostate GSE65478.AR.prostate 92 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 115 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 145 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 156 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 243 bp overlap
ChIP prostate_P19_T GSE130408.AR.prostate_P19_T 54 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 243 bp overlap
ASCL1 4 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 243 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 243 bp overlap
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 99 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 149 bp overlap
BRD4 4 datasets
ChIP 402-91 GSE111253.BRD4.402-91 221 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 145 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 243 bp overlap
ChIP hESC GSE33281.BRD4.hESC 75 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 198 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 174 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 169 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 241 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 126 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 219 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 187 bp overlap
EGR1 2 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
Motif ES_0h ES_0h-EGR1_MA0162.5 10 bp overlap
EGR2 2 datasets
Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap
Motif ES_0h ES_0h-EGR2_MA0472.2 11 bp overlap
EGR3 2 datasets
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
Motif ES_0h ES_0h-EGR3_MA0732.2 11 bp overlap
EGR4 2 datasets
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
Motif ES_0h ES_0h-EGR4_MA0733.2 11 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 201 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 156 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 158 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 203 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 243 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA1 6 datasets
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 180 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 243 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 189 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 54 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 140 bp overlap
ChIP prostate_P19_T GSE130408.FOXA1.prostate_P19_T 69 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 243 bp overlap
HOXB13 7 datasets
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 51 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 85 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 128 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 94 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 66 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 126 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 57 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 161 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
MAF 2 datasets
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
Motif ES_0h ES_0h-MAF_MA1520.2 13 bp overlap
MAFA 2 datasets
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
Motif ES_0h ES_0h-MAFA_MA1521.2 13 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 220 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 145 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 243 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 151 bp overlap
MYC 1 dataset
ChIP WA01 ENCSR000EBY.MYC.WA01 155 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 163 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 2 datasets
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 190 bp overlap
NRF1 1 dataset
ChIP WA01 ENCSR000ECC.NRF1.WA01 107 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 227 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 243 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 103 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 201 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 98 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 230 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 217 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 207 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
Motif ES_0h ES_0h-SNAI2_MA0745.3 8 bp overlap
SNAI3 2 datasets
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 226 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 209 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 200 bp overlap
SP3 2 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 128 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 98 bp overlap
TCF12 3 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 127 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 2 datasets
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 136 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 243 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 83 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF582 2 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF692 2 datasets
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
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