chr7 : 104,926,844 104,927,636
792 bp 103 TFs 4 linked genes
This 792 bp open chromatin element is linked to 4 target genes and is bound by 103 transcription factors.
Linked Genes
4 genes
Link type
Gene Expression Dist. to TSS Distance Link type
LINC01004 85.8 kb Distal Multiome
KMT2E-AS1 86.9 kb Distal Multiome
KMT2E 87.0 kb Distal Multiome
PMPCB 1629.8 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:104,921,844 – 104,932,636
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP GSE148358.AR.VCaP 144 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 78 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 265 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 205 bp overlap
Ascl2 2 datasets
Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 3 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 601 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 252 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 568 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 229 bp overlap
CTCF 2 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 130 bp overlap
CUX1 1 dataset
ChIP Hep-G2 ENCSR049KIZ.CUX1.Hep-G2 136 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 350 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 207 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 144 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 146 bp overlap
ESR1 5 datasets
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 244 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 351 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 247 bp overlap
ChIP MCF-7 GSE35109.ESR1.MCF-7 170 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 313 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 424 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 307 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 441 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 284 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 220 bp overlap
FOXA1 23 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 66 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 273 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 369 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 250 bp overlap
ChIP HepG2 ENCFF207NVJ 135 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 109 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 108 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 201 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 446 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 320 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 109 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 282 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 109 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 122 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 306 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 754 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 217 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 289 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 272 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 126 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 792 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 150 bp overlap
FOXA2 9 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 140 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 142 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 343 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 275 bp overlap
ChIP DE DE-FOXA2-1 737 bp overlap
ChIP DE DE-FOXA2-2 792 bp overlap
ChIP HepG2 ENCFF533COJ 167 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 419 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 792 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 381 bp overlap
ChIP DE DE-GATA4-2 687 bp overlap
ChIP foregut GSE117136.GATA4.foregut 276 bp overlap
ChIP foregut GSE117136.GATA4.foregut 376 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 792 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 458 bp overlap
ChIP DE DE-GATA6-2 774 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 334 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 779 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 722 bp overlap
ChIP H9 ERP004206.GATA6.H9 275 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 784 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 792 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 280 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 301 bp overlap
ChIP foregut GSE117136.GATA6.foregut 792 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 792 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 263 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 792 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 194 bp overlap
HIC2 1 dataset
Motif DE_24h DE_24h-HIC2_MA0738.2 6 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 111 bp overlap
HNF1B 4 datasets
ChIP H9 ERP004206.HNF1B.H9 139 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 426 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 66 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 173 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 239 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 104 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 331 bp overlap
HSF1 1 dataset
ChIP breast_tumor GSE38901.HSF1.breast_tumor 185 bp overlap
JUN 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 130 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 249 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 433 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 516 bp overlap
KLF15 2 datasets
Motif DE_36h DE_36h-KLF15_MA1513.2 8 bp overlap
Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 129 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 485 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 247 bp overlap
MSC 2 datasets
Motif DE_36h DE_36h-MSC_MA0665.1 10 bp overlap
Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap
MZF1 1 dataset
Motif DE_36h DE_36h-MZF1_MA0056.3 8 bp overlap
NFIA 1 dataset
Motif DE_36h DE_36h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_36h DE_36h-NFIX_MA0671.2 6 bp overlap
NKX2-3 1 dataset
Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap
NR2F2 3 datasets
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF483TVJ 213 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 127 bp overlap
NR2F6 2 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 209 bp overlap
ChIP HepG2 ENCFF429VKC 271 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 136 bp overlap
Neurod2 2 datasets
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nkx2-1 1 dataset
Motif DE_36h DE_36h-Nkx2-1_MA1994.2 7 bp overlap
Nr2F6 1 dataset
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
Nr2e3 1 dataset
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 501 bp overlap
Olig2 2 datasets
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PDX1 5 datasets
ChIP H9 ERP004206.PDX1.H9 199 bp overlap
ChIP hESC GSE58685.PDX1.hESC 85 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 377 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 503 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 519 bp overlap
POLR2A 2 datasets
ChIP body of pancreas ENCFF675RCN 78 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 551 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 198 bp overlap
PRDM1 2 datasets
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 139 bp overlap
ChIP WTC11 ENCFF108TMF 401 bp overlap
ChIP WTC11 ENCFF108TMF 257 bp overlap
Prdm5 2 datasets
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 303 bp overlap
Rarb 1 dataset
Motif DE_24h DE_24h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 378 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 378 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 289 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 165 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 255 bp overlap
SMAD2 1 dataset
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 238 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 528 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 486 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 277 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 299 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 96 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 267 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 269 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 140 bp overlap
SP3 2 datasets
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 338 bp overlap
SP9 2 datasets
Motif DE_36h DE_36h-SP9_MA1564.2 10 bp overlap
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
STAT3 8 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 129 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 547 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 296 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 236 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 204 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 285 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 354 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 209 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
TAL1::TCF3 2 datasets
Motif DE_36h DE_36h-TAL1TCF3_MA0091.2 10 bp overlap
Motif ES_0h ES_0h-TAL1TCF3_MA0091.2 10 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 177 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 147 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 356 bp overlap
TFAP4 3 datasets
Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 219 bp overlap
TP53 1 dataset
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 119 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 205 bp overlap
Tcf12 2 datasets
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tcf21 2 datasets
Motif DE_36h DE_36h-Tcf21_MA0832.2 10 bp overlap
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
VDR 2 datasets
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 159 bp overlap
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 286 bp overlap
ZBTB48 3 datasets
ChIP HEK293 ENCFF809BPK 374 bp overlap
ChIP HEK293 ENCFF809BPK 465 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 409 bp overlap
ZBTB7A 2 datasets
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 58 bp overlap
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 111 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 486 bp overlap
ZNF136 1 dataset
Motif DE_36h DE_36h-ZNF136_MA1588.1 15 bp overlap
ZNF213 1 dataset
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ZNF274 1 dataset
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
ZNF416 1 dataset
Motif DE_24h DE_24h-ZNF416_MA1979.2 10 bp overlap
ZNF44 2 datasets
ChIP HEK293T GSE78099.ZNF44.HEK293T 364 bp overlap
ChIP Hep-G2 ENCSR914HPP.ZNF44.Hep-G2 245 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ChIP HEK293 GSE76494.ZNF528.HEK293 282 bp overlap
ZNF550 2 datasets
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 337 bp overlap
ChIP HepG2 ENCFF175OGG 411 bp overlap
ZNF75D 1 dataset
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap
ZNF8 1 dataset
Motif DE_36h DE_36h-ZNF8_MA1718.1 20 bp overlap
Zic1::Zic2 2 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 2 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap