chr6 : 33,192,178 33,192,623
445 bp 84 TFs 3 linked genes
This 445 bp open chromatin element is linked to COL11A2, RXRB, and SLC39A7 and is bound by 84 transcription factors.
Linked Genes
3 genes
Distance
Gene Expression Dist. to TSS Distance Link type
COL11A2 at TSS At TSS Proximity
RXRB 8.0 kb Proximal Proximity
SLC39A7 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:33,187,178 – 33,197,623
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 149 bp overlap
AGO1 7 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 315 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 315 bp overlap
ChIP HepG2 ENCFF358CXO 371 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 365 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 327 bp overlap
ChIP K562 ENCFF025NLP 341 bp overlap
ChIP K562 ENCFF741BCI 340 bp overlap
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 99 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 212 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 66 bp overlap
BRD4 11 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 178 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 262 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 197 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 251 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 250 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 246 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 290 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 210 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 51 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 143 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 292 bp overlap
CTCF 3 datasets
ChIP ID00014 GSE76922.CTCF.ID00014 269 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 206 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 175 bp overlap
EGR1 3 datasets
ChIP A-375 GSE116190.EGR1.A-375 120 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 238 bp overlap
ChIP K562 ENCFF006PJY 183 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 301 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 98 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 67 bp overlap
EZH2 29 datasets
ChIP DOHH2 ENCFF528GDC 186 bp overlap
ChIP DOHH2 ENCFF528GDC 387 bp overlap
ChIP GM23248 ENCFF404ZHM 113 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 246 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 445 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 280 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 236 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 188 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 284 bp overlap
ChIP SU-DHL-6_DMSO GSE134136.EZH2.SU-DHL-6_DMSO 251 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 286 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 292 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 147 bp overlap
ChIP fibroblast of lung ENCFF479BAW 52 bp overlap
ChIP fibroblast of lung ENCFF479BAW 385 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 311 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 87 bp overlap
ChIP hepatocyte ENCFF552DZB 304 bp overlap
ChIP hepatocyte ENCFF552DZB 102 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 445 bp overlap
ChIP keratinocyte ENCFF070STK 140 bp overlap
ChIP keratinocyte ENCFF070STK 71 bp overlap
ChIP neural progenitor cell ENCFF018MKA 445 bp overlap
ChIP neural progenitor cell ENCFF018MKA 266 bp overlap
ChIP neural progenitor cell ENCFF018MKA 65 bp overlap
ChIP neural progenitor cell ENCFF472NFV 50 bp overlap
ChIP neural progenitor cell ENCFF472NFV 50 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 185 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 184 bp overlap
EZH2_phosphoT487 4 datasets
ChIP DOHH2 ENCSR562NOP.EZH2_phosphoT487.DOHH2 257 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 445 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 146 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 439 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 370 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 170 bp overlap
FOXO3 1 dataset
ChIP Hep-G2 GSE97661.FOXO3.Hep-G2 84 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 271 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 290 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 283 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 171 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 156 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 308 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 107 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 191 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 318 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 250 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 387 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 80 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 69 bp overlap
KMT2A 1 dataset
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 165 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 198 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 211 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 220 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 235 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 144 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 199 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94782.MYCN.Kelly 230 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 129 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 214 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 428 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 445 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 335 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 277 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 281 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 349 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 294 bp overlap
PCBP1 3 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 314 bp overlap
ChIP HepG2 ENCFF447SRJ 282 bp overlap
ChIP HepG2 ENCFF447SRJ 445 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 150 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 337 bp overlap
ChIP K562 ENCFF047BLG 168 bp overlap
ChIP K562 ENCFF648YPL 337 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 178 bp overlap
POU5F1 2 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 106 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 274 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 445 bp overlap
PTBP1 4 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 157 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 124 bp overlap
ChIP HepG2 ENCFF046OVF 191 bp overlap
ChIP HepG2 ENCFF472NST 198 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 176 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 224 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 203 bp overlap
RBM22 1 dataset
ChIP K-562 GSE120104.RBM22.K-562 186 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 445 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 445 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 200 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 385 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 186 bp overlap
SIN3A 6 datasets
ChIP H1 ENCFF042ZSL 441 bp overlap
ChIP H1 ENCFF042ZSL 209 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 295 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 165 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 366 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 349 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 392 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 84 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 79 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 92 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 75 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 357 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 288 bp overlap
SUPT5H 2 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 217 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 74 bp overlap
SUZ12 8 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 445 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 192 bp overlap
ChIP H1 ENCFF881NFR 281 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 335 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 72 bp overlap
ChIP NT2/D1 ENCFF574SXS 442 bp overlap
ChIP NT2/D1 ENCFF574SXS 394 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 419 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 214 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 161 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 160 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 445 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 445 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 432 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 181 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 393 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 388 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 420 bp overlap
ZBTB7A 4 datasets
ChIP Ishikawa ENCFF191NFH 165 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 322 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 53 bp overlap
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 424 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 186 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 384 bp overlap
ZNF83 1 dataset
ChIP HepG2 ENCFF450KKE 250 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 104 bp overlap