chr6 : 24,985,362 24,985,777
415 bp 82 TFs 0 linked genes
This 415 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:24,980,362 – 24,990,777
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 84 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 67 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 415 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 415 bp overlap
ATF2 3 datasets
ChIP H1 ENCFF295GZO 195 bp overlap
ChIP H1 ENCFF295GZO 415 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 178 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 415 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 415 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 203 bp overlap
BRD4 9 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 415 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 415 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 56 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 131 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 415 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 233 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 126 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 215 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 415 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 229 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 391 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 318 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 263 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 206 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 323 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 273 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 327 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 205 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 189 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 161 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 212 bp overlap
ESR1 6 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 127 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 221 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 179 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 245 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 415 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 221 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 269 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 317 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 346 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 415 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 219 bp overlap
FOXA1 1 dataset
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 69 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 352 bp overlap
ChIP DE DE-FOXA2-2 355 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 328 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 157 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 107 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 107 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 99 bp overlap
GATA3 1 dataset
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 92 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 415 bp overlap
ChIP DE DE-GATA4-2 415 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 399 bp overlap
ChIP DE DE-GATA6-2 415 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 326 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 358 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 152 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 353 bp overlap
HOXB13 2 datasets
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 213 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 309 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 111 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 243 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 189 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 314 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 136 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 207 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 299 bp overlap
MED1 4 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 153 bp overlap
ChIP RH4 GSE83726.MED1.RH4 342 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 158 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 297 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 268 bp overlap
MYOG 2 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 224 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 269 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 405 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 314 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 239 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 358 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 331 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 188 bp overlap
ChIP hESC GSE20650.NANOG.hESC 193 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 182 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 191 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 244 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 367 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 87 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 355 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 415 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 189 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 390 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 193 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 408 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 290 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 204 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 304 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 237 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 158 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 194 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 415 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 272 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 126 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 296 bp overlap
SMARCA4 6 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 301 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 415 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 415 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 415 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 325 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 278 bp overlap
SMARCB1 2 datasets
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 413 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 415 bp overlap
SMARCC1 5 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 354 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 382 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 415 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 182 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 167 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 294 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 347 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 298 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 257 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 253 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 233 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 258 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 174 bp overlap
ChIP WTC11 ENCFF688PEU 415 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 254 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 140 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 303 bp overlap
ChIP hESC GSE122298.TBP.hESC 227 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 129 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 135 bp overlap
TBX5 5 datasets
ChIP G296S GSE85628.TBX5.G296S 293 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 293 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 351 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 326 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 239 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 131 bp overlap
TP53 45 datasets
ChIP GM00011 GSE55727.TP53.GM00011 415 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 415 bp overlap
ChIP H9 GSE39912.TP53.H9 401 bp overlap
ChIP H9_IFI16 GSE142050.TP53.H9_IFI16 415 bp overlap
ChIP H9_ectoderm_IFI16 GSE142050.TP53.H9_ectoderm_IFI16 415 bp overlap
ChIP H9_mesoderm_IFI16 GSE142050.TP53.H9_mesoderm_IFI16 415 bp overlap
ChIP HCT-116_5FU GSE58506.TP53.HCT-116_5FU 346 bp overlap
ChIP HCT-116_DMSO_KOATF3 GSE74355.TP53.HCT-116_DMSO_KOATF3 391 bp overlap
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 394 bp overlap
ChIP HCT-116_Nutlin3a-SC GSE125927.TP53.HCT-116_Nutlin3a-SC 306 bp overlap
ChIP HCT-116_nutlin GSE86164.TP53.HCT-116_nutlin 415 bp overlap
ChIP HCT-116_siGLIS2-1-5FU GSE125927.TP53.HCT-116_siGLIS2-1-5FU 409 bp overlap
ChIP IMR-90 GSE115940.TP53.IMR-90 331 bp overlap
ChIP IMR-90_NUT3A GSE58740.TP53.IMR-90_NUT3A 415 bp overlap
ChIP K-562_Daunorubicin GSE131484.TP53.K-562_Daunorubicin 388 bp overlap
ChIP K-562_R282W_Daunorubicin GSE131484.TP53.K-562_R282W_Daunorubicin 266 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 415 bp overlap
ChIP MCF-7_1h_IR_10Gy GSE100099.TP53.MCF-7_1h_IR_10Gy 396 bp overlap
ChIP MCF-7_2-5h_IR_10Gy GSE100099.TP53.MCF-7_2-5h_IR_10Gy 415 bp overlap
ChIP MCF-7_4h_IR_10Gy GSE100099.TP53.MCF-7_4h_IR_10Gy 356 bp overlap
ChIP MCF-7_7-5h_IR_10Gy GSE100099.TP53.MCF-7_7-5h_IR_10Gy 415 bp overlap
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 415 bp overlap
ChIP MCF-7_NCS-treated GSE101737.TP53.MCF-7_NCS-treated 336 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 415 bp overlap
ChIP MOLM-13_R282W_DMSO GSE131484.TP53.MOLM-13_R282W_DMSO 415 bp overlap
ChIP MOLM-13_R282W_Daunorubicin GSE131484.TP53.MOLM-13_R282W_Daunorubicin 367 bp overlap
ChIP SJSA-1 GSE86164.TP53.SJSA-1 267 bp overlap
ChIP SJSA-1_nutlin GSE86164.TP53.SJSA-1_nutlin 403 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 321 bp overlap
ChIP U2OS_DMSO GSE46641.TP53.U2OS_DMSO 302 bp overlap
ChIP U2OS_DXR GSE46641.TP53.U2OS_DXR 249 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 376 bp overlap
ChIP WTC11 ENCFF359JCU 415 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 406 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 415 bp overlap
ChIP keratinocyte GSE56674.TP53.keratinocyte 345 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP53.keratinocyte_ADRIA 364 bp overlap
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 415 bp overlap
ChIP lymphocyte_104_Nutlin GSE110368.TP53.lymphocyte_104_Nutlin 304 bp overlap
ChIP lymphocyte_116_DXR GSE110368.TP53.lymphocyte_116_DXR 361 bp overlap
ChIP lymphocyte_116_Nutlin GSE110368.TP53.lymphocyte_116_Nutlin 390 bp overlap
ChIP lymphocyte_45_DXR GSE110368.TP53.lymphocyte_45_DXR 205 bp overlap
ChIP lymphocyte_45_Nutlin GSE110368.TP53.lymphocyte_45_Nutlin 135 bp overlap
ChIP lymphocyte_90_DXR GSE110368.TP53.lymphocyte_90_DXR 273 bp overlap
ChIP lymphocyte_90_Nutlin GSE110368.TP53.lymphocyte_90_Nutlin 295 bp overlap
TP63 12 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 392 bp overlap
ChIP KYSE-70 GSE46837.TP63.KYSE-70 374 bp overlap
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 204 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 415 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 341 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 242 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 281 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 346 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 354 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 335 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 322 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 259 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 306 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 326 bp overlap
ChIP HEK293 ENCFF265CEM 415 bp overlap
ChIP HEK293 ENCFF582MWI 415 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 412 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 292 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 233 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 172 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 412 bp overlap
ZNF143 4 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 323 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 171 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 184 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 179 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 168 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 250 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 237 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 245 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 394 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 415 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 335 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 308 bp overlap