chr5 : 176,739,443 – 176,739,625
182 bp 74 TFs 2 linked genes
This 182 bp open chromatin element is linked to ENSG00000251446 and LINC01574 and is bound by 74 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000251446 at TSS At TSS Proximity
LINC01574 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:176,734,443 – 176,744,625
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 152 bp overlap
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 149 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 160 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 182 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 147 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 182 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 113 bp overlap
BRD4 7 datasets
ChIP BE2C GSE80151.BRD4.BE2C 182 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 182 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 182 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 95 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 182 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 113 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 182 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 172 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 73 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 166 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 102 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 182 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 57 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 182 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 182 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 182 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 141 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 142 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 136 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 132 bp overlap
ChIP neural cell ENCFF442QNK 92 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 182 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 131 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 182 bp overlap
EZH2 7 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 182 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 160 bp overlap
ChIP astrocyte ENCFF365JTP 182 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 164 bp overlap
ChIP fibroblast of lung ENCFF479BAW 182 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 182 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 182 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 149 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 158 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 182 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 182 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 178 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 68 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 182 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 60 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 182 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 182 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 182 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 107 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 63 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 182 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 160 bp overlap
KLF5 1 dataset
ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 135 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 127 bp overlap
ChIP K562 ENCFF320EQC 145 bp overlap
MAX 6 datasets
ChIP H1 ENCFF601FOM 119 bp overlap
ChIP H1 ENCFF914VQY 182 bp overlap
ChIP K562 ENCFF524IJO 53 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 182 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 182 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 182 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 141 bp overlap
MYC 3 datasets
ChIP Kelly GSE138295.MYC.Kelly 85 bp overlap
ChIP NB69 GSE138295.MYC.NB69 172 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 113 bp overlap
MYCN 11 datasets
ChIP BE2C GSE80151.MYCN.BE2C 182 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 182 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 126 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 127 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 182 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 125 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 182 bp overlap
ChIP NGP GSE80151.MYCN.NGP 55 bp overlap
ChIP NGP GSE80151.MYCN.NGP 55 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 182 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 182 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 182 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 117 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 88 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 182 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 113 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 117 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 141 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 141 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 162 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 182 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 148 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 182 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 75 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 77 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 80 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 108 bp overlap
RUNX1-RUNX1T1 1 dataset
ChIP AML GSE131939.RUNX1-RUNX1T1.AML 142 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 152 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 168 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 182 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 133 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 141 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 182 bp overlap
SMAD4 1 dataset
ChIP WTC11 ENCFF195KVB 61 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 83 bp overlap
SMARCC1 1 dataset
ChIP ESC S25-ESC-d0-BAF155-exp1 67 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 178 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 165 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 182 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 182 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 118 bp overlap
TAF15 1 dataset
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 139 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 88 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 182 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 96 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 182 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 182 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 108 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 73 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 182 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 182 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 146 bp overlap
ZBTB33 1 dataset
ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 139 bp overlap
ZBTB43 2 datasets
ChIP WTC11 ENCFF058JUB 182 bp overlap
ChIP WTC11 ENCFF058JUB 71 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 182 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 181 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 58 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 85 bp overlap
Huangfu Lab · Publications · Resources · Contact