chr5 : 140,111,252 – 140,111,490
238 bp 69 TFs 2 linked genes
This 238 bp open chromatin element is linked to PURA and MALINC1 and is bound by 69 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PURA 3.5 kb Proximal Proximity
MALINC1 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:140,106,252 – 140,116,490
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 238 bp overlap
BCOR 3 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 64 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 224 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 238 bp overlap
BRD4 1 dataset
ChIP HAP1 GSE108387.BRD4.HAP1 238 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 93 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF163BSY 238 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 238 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 110 bp overlap
EP300 2 datasets
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 108 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 91 bp overlap
EZH2 10 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 238 bp overlap
ChIP GM23338 ENCFF613YON 83 bp overlap
ChIP GM23338 ENCFF886DXX 110 bp overlap
ChIP H1 ENCFF232NZA 175 bp overlap
ChIP H1 ENCFF232NZA 157 bp overlap
ChIP hepatocyte ENCFF552DZB 231 bp overlap
ChIP neural cell ENCFF610EPB 51 bp overlap
ChIP neural progenitor cell ENCFF018MKA 237 bp overlap
ChIP neural progenitor cell ENCFF018MKA 120 bp overlap
ChIP neural progenitor cell ENCFF472NFV 238 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 169 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 238 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 61 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 238 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF744ALD 144 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 238 bp overlap
ChIP K562 ENCFF348IBL 155 bp overlap
ChIP K562 ENCFF771OHZ 160 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 112 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 118 bp overlap
JARID2 4 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 238 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 92 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 98 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 65 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF128TYE 152 bp overlap
ChIP K562 ENCFF934ZRG 91 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 113 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 127 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 118 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 233 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 238 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 238 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 111 bp overlap
KLF9 3 datasets
ChIP HEK293 ENCFF588INF 238 bp overlap
ChIP HEK293 ENCFF588INF 143 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 114 bp overlap
KMT2A 8 datasets
ChIP HEK293T_C-term GSE90762.KMT2A.HEK293T_C-term 238 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 238 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 215 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 238 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 238 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 238 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 238 bp overlap
ChIP MCF-7_C-term_CX4945 GSE90762.KMT2A.MCF-7_C-term_CX4945 233 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 182 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 238 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 166 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 103 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 191 bp overlap
NR3C1 1 dataset
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 50 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 77 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 238 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 195 bp overlap
ChIP HEK293 ENCFF016MNJ 151 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 238 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 225 bp overlap
PGR 2 datasets
ChIP T-47D GSE31129.PGR.T-47D 79 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 61 bp overlap
POLR2A 4 datasets
ChIP PFSK-1 ENCFF576NIT 220 bp overlap
ChIP PFSK-1 ENCFF576NIT 238 bp overlap
ChIP Panc1 ENCFF290KAB 238 bp overlap
ChIP SK-N-MC ENCFF088IVG 203 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 172 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 81 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 56 bp overlap
PTBP1 4 datasets
ChIP K-562 ENCSR948KMB.PTBP1.K-562 52 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 52 bp overlap
ChIP K562 ENCFF238NLS 113 bp overlap
ChIP K562 ENCFF773HPT 116 bp overlap
RBBP5 2 datasets
ChIP K562 ENCFF070CVK 238 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 101 bp overlap
RBM25 1 dataset
ChIP K-562 ENCSR791OZM.RBM25.K-562 88 bp overlap
REST 6 datasets
ChIP HEK293 ENCSR896UBV.REST.HEK293 65 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 75 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 52 bp overlap
ChIP K562 ENCFF758CZL 138 bp overlap
ChIP PFSK-1 ENCFF845VHA 65 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 83 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 238 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 238 bp overlap
SIN3A 2 datasets
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 79 bp overlap
ChIP Panc1 ENCFF898EEQ 172 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 207 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 238 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 125 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 238 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 118 bp overlap
SP7 3 datasets
ChIP HEK293 ENCFF733RBE 238 bp overlap
ChIP HEK293 ENCFF733RBE 152 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 61 bp overlap
SUZ12 3 datasets
ChIP H1 ENCFF881NFR 238 bp overlap
ChIP H1 ENCFF881NFR 138 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 79 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 108 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 238 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 94 bp overlap
TOE1 1 dataset
ChIP K562 ENCFF728FRA 197 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 238 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 86 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 199 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 136 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 156 bp overlap
ChIP HEK293 ENCFF752TCU 238 bp overlap
ChIP HEK293 ENCFF752TCU 227 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 97 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 52 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 52 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 102 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 145 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 115 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 238 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 80 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 206 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 196 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 85 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 73 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCFF638TIB 56 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 106 bp overlap
ChIP HEK293 ENCFF784SLD 87 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 238 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 89 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 123 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 136 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 63 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 226 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 71 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 238 bp overlap
ZNF76 3 datasets
ChIP HEK293 ENCFF374TCG 159 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 156 bp overlap
ChIP HEK293 GSE76494.ZNF76.HEK293 92 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 100 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 105 bp overlap
ZXDB 3 datasets
ChIP HEK293 ENCFF835SGA 238 bp overlap
ChIP HEK293 ENCFF835SGA 203 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 86 bp overlap
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