chr5 : 115,355,659 115,356,133
474 bp 107 TFs 0 linked genes
This 474 bp open chromatin element has no linked target genes and is bound by 107 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:115,350,659 – 115,361,133
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
107 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 206 bp overlap
BACH1 1 dataset
ChIP K562 ENCFF419VIM 346 bp overlap
BRD4 1 dataset
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 295 bp overlap
CHD4 1 dataset
ChIP HaCaT GSE139685.CHD4.HaCaT 255 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 272 bp overlap
CTCF 1 dataset
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 374 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 77 bp overlap
EHF 1 dataset
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 187 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 129 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 195 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 195 bp overlap
ETV1 1 dataset
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FOXA1 29 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 129 bp overlap
Motif DE_48h DE_48h-FOXA1_MA0148.5 8 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 189 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 250 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 171 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 151 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 222 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 196 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 186 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 231 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 144 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 274 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 216 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 229 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 226 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 183 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 243 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 208 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 265 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 310 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 334 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 413 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 181 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 203 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 149 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 233 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 312 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 283 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 235 bp overlap
FOXA2 7 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 277 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 245 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 271 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 120 bp overlap
ChIP DE DE-FOXA2-1 474 bp overlap
ChIP DE DE-FOXA2-2 390 bp overlap
Motif DE_48h DE_48h-FOXA2_MA0047.4 8 bp overlap
FOXA3 2 datasets
Motif DE_48h DE_48h-FOXA3_MA1683.2 7 bp overlap
ChIP K562 ENCFF781VSC 267 bp overlap
FOXB1 1 dataset
Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_48h DE_48h-FOXD1_MA0031.2 7 bp overlap
FOXG1 1 dataset
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_48h DE_48h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_48h DE_48h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_48h DE_48h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_48h DE_48h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_48h DE_48h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_48h DE_48h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_48h DE_48h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_48h DE_48h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_48h DE_48h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_48h DE_48h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_48h DE_48h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_48h DE_48h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_48h DE_48h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_48h DE_48h-Foxo3_MA0157.4 7 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 176 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 246 bp overlap
GATA2 1 dataset
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 164 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 474 bp overlap
ChIP DE DE-GATA4-2 375 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 321 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 421 bp overlap
ChIP DE DE-GATA6-2 389 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 347 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 464 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 328 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 423 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 438 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 365 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 379 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 215 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 367 bp overlap
ChIP foregut GSE117136.GATA6.foregut 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 208 bp overlap
Gata3 1 dataset
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
IRF9 2 datasets
ChIP K-562 ENCSR926KTP.IRF9.K-562 87 bp overlap
ChIP K562 ENCFF346PQL 93 bp overlap
JARID2 1 dataset
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 67 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 290 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 256 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 210 bp overlap
MXI1 1 dataset
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
MYOG 1 dataset
Motif DE_48h DE_48h-MYOG_MA0500.3 8 bp overlap
MZF1 1 dataset
Motif DE_48h DE_48h-MZF1_MA0056.3 8 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 329 bp overlap
NR2C1 3 datasets
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
ChIP K-562 ENCSR178DEG.NR2C1.K-562 146 bp overlap
ChIP K562 ENCFF568JLK 232 bp overlap
NR2C2 1 dataset
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
NR4A1 2 datasets
ChIP K562 ENCFF998LHF 315 bp overlap
ChIP K562 ENCFF998LHF 116 bp overlap
Nr1H2 1 dataset
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 300 bp overlap
PTRF 1 dataset
ChIP K-562 ENCSR126FZN.PTRF.K-562 87 bp overlap
REL 1 dataset
Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap
RELA 10 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 426 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 393 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 456 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 436 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 452 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 301 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 147 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 228 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 187 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 193 bp overlap
Rhox11 1 dataset
Motif DE_48h DE_48h-Rhox11_MA0629.2 9 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 381 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 381 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 305 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 423 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 439 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 319 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 251 bp overlap
Stat2 1 dataset
Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 236 bp overlap
TAL1 1 dataset
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 168 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 164 bp overlap
TFAP2A 3 datasets
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 167 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 143 bp overlap
TFAP2C 2 datasets
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 256 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 232 bp overlap
TFEB 1 dataset
Motif DE_48h DE_48h-TFEB_MA0692.2 8 bp overlap
THRA 1 dataset
Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 259 bp overlap
TRPS1 1 dataset
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 205 bp overlap
USF2 4 datasets
ChIP GM12878 GSE97661.USF2.GM12878 240 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 210 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 129 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 313 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 296 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 100 bp overlap
Yy1 1 dataset
Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap
ZFP42 1 dataset
Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 160 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 262 bp overlap
ZNF331 5 datasets
ChIP GM23338 ENCFF410NSZ 74 bp overlap
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 108 bp overlap
ChIP HEK293 GSE76494.ZNF331.HEK293 149 bp overlap
ChIP HEK293T GSE78099.ZNF331.HEK293T 202 bp overlap
ChIP HepG2 ENCFF842SZN 130 bp overlap
ZNF675 1 dataset
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
ZNF768 1 dataset
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Zfx 1 dataset
Motif DE_48h DE_48h-Zfx_MA0146.3 10 bp overlap