chr5 : 78,624,157 78,624,357
200 bp 75 TFs 0 linked genes
This 200 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:78,619,157 – 78,629,357
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 200 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 200 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 200 bp overlap
BRD3 1 dataset
ChIP HUVEC-C_MS417 GSE60171.BRD3.HUVEC-C_MS417 144 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 200 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 127 bp overlap
CBX3 1 dataset
ChIP T-47D-MTVL GSE64467.CBX3.T-47D-MTVL 128 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 200 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 200 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 167 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 187 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 164 bp overlap
CUX1 1 dataset
ChIP Hep-G2 ENCSR049KIZ.CUX1.Hep-G2 91 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF451CNG 200 bp overlap
ChIP SK-N-SH ENCFF829RWA 162 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 200 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 193 bp overlap
ESRRG 3 datasets
ChIP SK-N-SH ENCFF394HLU 157 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 182 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 164 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 117 bp overlap
FOXA2 2 datasets
ChIP liver ENCSR080XEY.FOXA2.liver 69 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 147 bp overlap
GATA2 5 datasets
ChIP SH-SY5Y ENCFF485YIB 200 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 200 bp overlap
ChIP SK-N-SH ENCFF764OZD 173 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 200 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 172 bp overlap
GATA3 8 datasets
ChIP BE2C GSE65664.GATA3.BE2C 200 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 200 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 200 bp overlap
ChIP SH-SY5Y ENCFF475HYF 200 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 200 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 188 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 200 bp overlap
ChIP SK-N-SH ENCFF040SSB 200 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 200 bp overlap
ChIP DE DE-GATA4-2 200 bp overlap
ChIP foregut GSE117136.GATA4.foregut 200 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 200 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 200 bp overlap
ChIP DE DE-GATA6-2 200 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 200 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 200 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 200 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 200 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 200 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 200 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 120 bp overlap
ChIP foregut GSE117136.GATA6.foregut 200 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 200 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 200 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 200 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 200 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 200 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 200 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 200 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 200 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 116 bp overlap
HNF4A 2 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 123 bp overlap
ChIP liver ERP002306.HNF4A.liver 80 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 77 bp overlap
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 60 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 200 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 182 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 200 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 164 bp overlap
KDM1A 3 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 186 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 138 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 197 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 200 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 200 bp overlap
MXI1 3 datasets
ChIP SK-N-SH ENCFF746HVJ 200 bp overlap
ChIP SK-N-SH ENCFF746HVJ 78 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 200 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 200 bp overlap
MYCN 7 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 200 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 200 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 200 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 200 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 200 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 200 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 173 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 200 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 151 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 102 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 105 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 79 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 129 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 90 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 200 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR338MMB.NR2F2.liver 134 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 200 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 152 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF243FIR 60 bp overlap
ChIP liver ERP002306.ONECUT1.liver 138 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 200 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 90 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 200 bp overlap
ChIP K562 ENCFF286KMN 200 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 139 bp overlap
PDX1 6 datasets
ChIP H9 ERP004206.PDX1.H9 135 bp overlap
ChIP hESC GSE58685.PDX1.hESC 146 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 200 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 200 bp overlap
ChIP islet ERP001456.PDX1.islet 149 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 200 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 200 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 200 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 58 bp overlap
RAD21 4 datasets
ChIP RH4 GSE83726.RAD21.RH4 118 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 200 bp overlap
ChIP liver ENCFF485PAC 200 bp overlap
ChIP liver ENCFF522JHE 200 bp overlap
RARA 4 datasets
ChIP SK-N-SH GSE69119.RARA.SK-N-SH 200 bp overlap
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 167 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 200 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 200 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 200 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 200 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 200 bp overlap
REST 1 dataset
ChIP liver ENCSR893QWP.REST.liver 74 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 124 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 200 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 200 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 200 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 200 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 200 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 200 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 200 bp overlap
SMARCA4 5 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 200 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 200 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 102 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 98 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 200 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 200 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 200 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 200 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 193 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 159 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 200 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 200 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 192 bp overlap
TAL1 1 dataset
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 131 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 200 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 200 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 200 bp overlap
TCF4 3 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 142 bp overlap
ChIP SK-N-SH ENCFF270OWF 200 bp overlap
ChIP SK-N-SH ENCFF270OWF 161 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 194 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 194 bp overlap
ChIP SK-N-SH ENCFF754TJT 200 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 166 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 200 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 137 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 200 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 200 bp overlap
TWIST1 2 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 196 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 196 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 194 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 159 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 200 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 190 bp overlap