chr5 : 59,751,650 59,752,065
415 bp 77 TFs 0 linked genes
This 415 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:59,746,650 – 59,757,065
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 204 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCFF037PYH 154 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 185 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 247 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 118 bp overlap
CDX2 3 datasets
ChIP COLO-320 GSE30026.CDX2.COLO-320 62 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 125 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 181 bp overlap
CEBPB 1 dataset
ChIP HeLa-S3 ENCFF722WEG 132 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 84 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 352 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 374 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 97 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 252 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 408 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 147 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 377 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 415 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 191 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 166 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 74 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 74 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 326 bp overlap
FOSL2 1 dataset
ChIP A-549 ENCSR448TVS.FOSL2.A-549 163 bp overlap
FOXA1 4 datasets
ChIP PDAC GSE64557.FOXA1.PDAC 55 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 415 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 415 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 174 bp overlap
GABPA 1 dataset
ChIP HepG2 ENCFF180FFY 57 bp overlap
GATA2 3 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 292 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 220 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 50 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 265 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 269 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 223 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 384 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 415 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 415 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 415 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 415 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 415 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 375 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 306 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 208 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 196 bp overlap
HSF1 2 datasets
ChIP MO91 GSE45852.HSF1.MO91 67 bp overlap
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 166 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 149 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 179 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 288 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 386 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 415 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 178 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 150 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 159 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 79 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 201 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 269 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 66 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 199 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 334 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 248 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 191 bp overlap
NFATC2 1 dataset
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 66 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 287 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 274 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 403 bp overlap
POLR2A 6 datasets
ChIP A549 ENCFF034EBG 414 bp overlap
ChIP A549 ENCFF034EBG 195 bp overlap
ChIP HeLa-S3 ENCFF224LWS 354 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 393 bp overlap
ChIP HeLa-S3 ENCFF773DNG 382 bp overlap
ChIP SK-N-MC ENCFF088IVG 125 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 230 bp overlap
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 125 bp overlap
PRDM6 2 datasets
ChIP HEK293 GSE76494.PRDM6.HEK293 169 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 240 bp overlap
RELA 5 datasets
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 137 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 85 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 53 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 52 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 145 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCFF513YVP 79 bp overlap
SMARCA2 4 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 352 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 286 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 374 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 91 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 255 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 207 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 317 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 228 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 337 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 220 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 54 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 342 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 204 bp overlap
SPI1 1 dataset
ChIP U-937 GSE128834.SPI1.U-937 171 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 225 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 76 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 211 bp overlap
TBX5 1 dataset
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 261 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 335 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 353 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 341 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 415 bp overlap
ZNF18 4 datasets
ChIP HEK293 ENCFF066NGR 159 bp overlap
ChIP HEK293 ENCFF066NGR 386 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 323 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 236 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 339 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 300 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 414 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 415 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 271 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 257 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 121 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 124 bp overlap
ZSCAN16 2 datasets
ChIP HEK293 ENCSR864VJE.ZSCAN16.HEK293 184 bp overlap
ChIP HEK293 GSE76494.ZSCAN16.HEK293 255 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 170 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 165 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 256 bp overlap