chr4 : 143,911,893 – 143,912,691
798 bp 113 TFs 2 linked genes
This 798 bp open chromatin element is linked to ENSG00000249741 and GYPE and is bound by 113 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000249741 at TSS At TSS Proximity
GYPE 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:143,906,893 – 143,917,691
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 409 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 381 bp overlap
BARHL1 1 dataset
Motif DE_12h DE_12h-BARHL1_MA0877.4 6 bp overlap
BARHL2 1 dataset
Motif DE_12h DE_12h-BARHL2_MA0635.2 6 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 77 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 124 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 277 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 195 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 328 bp overlap
BRD4 4 datasets
ChIP DND41_E GSE54379.BRD4.DND41_E 351 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 442 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 186 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 377 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CTCFL 3 datasets
ChIP K-562 GSE70764.CTCFL.K-562 287 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 283 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 332 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 561 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 200 bp overlap
E2F6 4 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 143 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 117 bp overlap
ChIP K562 ENCFF163WMT 417 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF813OXE 62 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 180 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 10 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP GM12878 ENCFF432UGA 165 bp overlap
ChIP GM12878 ENCFF692SMY 457 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 237 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 200 bp overlap
ChIP K562 ENCFF245JDF 471 bp overlap
ChIP K562 ENCFF496AKI 185 bp overlap
ChIP K562 ENCFF886KFV 645 bp overlap
ChIP SEM GSE117864.ELF1.SEM 148 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 228 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
ELK1 1 dataset
Motif DE_12h DE_12h-ELK1_MA0028.3 9 bp overlap
ELK3 1 dataset
Motif DE_12h DE_12h-ELK3_MA0759.3 9 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
ERG 6 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 336 bp overlap
ChIP K-562 GSE23730.ERG.K-562 199 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 304 bp overlap
ChIP SEM GSE117864.ERG.SEM 354 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 551 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 482 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETV3 1 dataset
Motif DE_12h DE_12h-ETV3_MA0763.2 9 bp overlap
ETV4 1 dataset
Motif DE_12h DE_12h-ETV4_MA0764.4 9 bp overlap
ETV5 1 dataset
Motif DE_12h DE_12h-ETV5_MA0765.4 9 bp overlap
ETV5::HOXA2 1 dataset
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
ETV6 8 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 269 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 149 bp overlap
ChIP K-562 ENCSR000FCE.ETV6.K-562 201 bp overlap
ChIP K-562 ENCSR124BJR.ETV6.K-562 130 bp overlap
ChIP K562 ENCFF311NMS 445 bp overlap
ChIP K562 ENCFF337WJB 285 bp overlap
ChIP WTC11 ENCFF812SCD 437 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FEV 1 dataset
Motif DE_12h DE_12h-FEV_MA0156.4 9 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FLI1 3 datasets
Motif DE_12h DE_12h-FLI1_MA0475.3 9 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 561 bp overlap
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 202 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 308 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
GABPA 4 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
ChIP K-562 ENCSR000BLO.GABPA.K-562 185 bp overlap
ChIP K562 ENCFF139LXS 751 bp overlap
ChIP K562 ENCFF996TSW 317 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 260 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 237 bp overlap
HNRNPLL 1 dataset
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 173 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF824TGK 198 bp overlap
ChIP K562 ENCFF771OHZ 229 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 203 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 322 bp overlap
KMT2A 4 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 502 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 175 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 642 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 184 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 397 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 437 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 585 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 187 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 306 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PHF8 2 datasets
ChIP K-562 ENCSR000AQH.PHF8.K-562 198 bp overlap
ChIP K562 ENCFF217UCA 206 bp overlap
POLR2A 10 datasets
ChIP GM12878 ENCFF521FXC 250 bp overlap
ChIP GM12891 ENCFF379FCI 501 bp overlap
ChIP GM12892 ENCFF506PGQ 477 bp overlap
ChIP GM15510 ENCFF880HVJ 437 bp overlap
ChIP GM18951 ENCFF079KKO 497 bp overlap
ChIP GM19099 ENCFF726IBN 477 bp overlap
ChIP K562 ENCFF262YXJ 215 bp overlap
ChIP erythroblast ENCFF498VMR 136 bp overlap
ChIP erythroblast ENCFF498VMR 427 bp overlap
ChIP spleen ENCFF706IUS 259 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 517 bp overlap
ChIP K562 ENCFF648YPL 473 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 375 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 462 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 462 bp overlap
ChIP K562 ENCFF196WTG 550 bp overlap
ChIP K562 ENCFF967GRF 595 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 406 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 400 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 249 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 295 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 353 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 263 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 344 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 254 bp overlap
SPDEF 1 dataset
Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 407 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 240 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 268 bp overlap
STAT3 2 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 182 bp overlap
STAT5B 1 dataset
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 340 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TAF1 2 datasets
ChIP GM12891 ENCFF254YPA 337 bp overlap
ChIP K562 ENCFF491WAE 397 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 354 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 545 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 272 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 545 bp overlap
ZBED1 1 dataset
Motif DE_12h DE_12h-ZBED1_MA0749.2 12 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB33 2 datasets
ChIP K562 ENCFF427SDV 505 bp overlap
ChIP K562 ENCFF875HLX 167 bp overlap
ZBTB7A 2 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 227 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZFP57 1 dataset
Motif DE_12h DE_12h-ZFP57_MA1583.2 7 bp overlap
ZFX 2 datasets
ChIP K562 ENCFF169LZT 503 bp overlap
ChIP K562 ENCFF536AJO 631 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF610 2 datasets
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF93 3 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zbtb2 1 dataset
Motif DE_12h DE_12h-Zbtb2_MA2340.1 10 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
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