chr4 : 123,649,322 123,649,508
186 bp 89 TFs 1 linked gene
This 186 bp open chromatin element is linked to LINC01091 and is bound by 89 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01091 734 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:123,644,322 – 123,654,508
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 186 bp overlap
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 186 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 165 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 186 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 162 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 186 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCFF576UEQ 186 bp overlap
BAZ2A 1 dataset
ChIP HepG2 ENCFF797RVO 62 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 186 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 186 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 186 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 186 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 186 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 186 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 158 bp overlap
BRD4 9 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 65 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 107 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 186 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 186 bp overlap
ChIP Hep-G2 ENCSR514EOE.BRD4.Hep-G2 186 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 170 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 144 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 56 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 156 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 162 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 186 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 180 bp overlap
CHD2 1 dataset
ChIP GM12878 ENCFF697XCL 186 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 186 bp overlap
ChIP GM12878 ENCFF249AMT 59 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 186 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 186 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 186 bp overlap
EBF1 5 datasets
ChIP GM12878 ENCFF167CZS 186 bp overlap
ChIP GM12878 ENCFF813OXE 151 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 186 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 56 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 89 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 186 bp overlap
EP300 4 datasets
ChIP GM12878 ENCFF039QRE 186 bp overlap
ChIP GM12878 ENCFF242HCG 186 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 182 bp overlap
ChIP GM12878 ENCSR000DZD.EP300.GM12878 154 bp overlap
FOXA1 3 datasets
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 186 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 67 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 181 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 79 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 73 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 186 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 186 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 148 bp overlap
HNF1A 1 dataset
ChIP NY15 GSE108150.HNF1A.NY15 76 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 172 bp overlap
HSF1 2 datasets
ChIP GM12878 ENCFF845UGP 186 bp overlap
ChIP GM12878 ENCSR009MBP.HSF1.GM12878 158 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF616FJX 186 bp overlap
ChIP GM12878 ENCFF753XDO 186 bp overlap
ChIP GM12878 ENCFF824TGK 186 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 186 bp overlap
ChIP GM12878 ENCFF918AID 186 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 186 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 186 bp overlap
IRF4 4 datasets
ChIP B-cell GSE142493.IRF4.B-cell 186 bp overlap
ChIP GM12878 ENCFF769ZDL 186 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 186 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 128 bp overlap
IRF8 1 dataset
ChIP THP-1 GSE123872.IRF8.THP-1 105 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 54 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 186 bp overlap
MBD1 1 dataset
ChIP HepG2 ENCFF348VDD 165 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 127 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 159 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 186 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 161 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 186 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 186 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 186 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 161 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 186 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 180 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 186 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 186 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 186 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 129 bp overlap
NKRF 1 dataset
ChIP GM12878 ENCFF392NLB 186 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 186 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 186 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCFF482PUW 186 bp overlap
ChIP GM12878 ENCFF503GOV 186 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 186 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 186 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 186 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 186 bp overlap
PRDM1 2 datasets
ChIP plasmablast GSE142493.PRDM1.plasmablast 155 bp overlap
ChIP plasmablast_G9A-i GSE142493.PRDM1.plasmablast_G9A-i 125 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 157 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 127 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 150 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 186 bp overlap
RUNX1 4 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 84 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 186 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 186 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 123 bp overlap
SKIL 3 datasets
ChIP GM12878 ENCFF171OVM 186 bp overlap
ChIP GM12878 ENCFF171OVM 186 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 186 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 100 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 125 bp overlap
SMARCA4 5 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 186 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 156 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 172 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 84 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 141 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 63 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 56 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 186 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 167 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 186 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 164 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 186 bp overlap
SP140L 1 dataset
ChIP HepG2 ENCFF203CWF 186 bp overlap
SPI1 16 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 126 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 156 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 161 bp overlap
ChIP GM12878 ENCFF134LCP 144 bp overlap
ChIP GM12891 ENCFF563IUT 101 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 134 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 136 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 127 bp overlap
ChIP OCI-Ly3 GSE56857.SPI1.OCI-Ly3 148 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 120 bp overlap
ChIP RS4-11 GSE71616.SPI1.RS4-11 137 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 181 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 95 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 113 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 163 bp overlap
ChIP primary-B-cell_donorC GSE128834.SPI1.primary-B-cell_donorC 109 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 104 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 186 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 186 bp overlap
STAT3 1 dataset
ChIP B-cell GSE123398.STAT3.B-cell 120 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 123 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 186 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 186 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 186 bp overlap
TCF12 3 datasets
ChIP GM12878 ENCFF433DMU 186 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 184 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 161 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 153 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 50 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 146 bp overlap
TOPORS 1 dataset
ChIP HepG2 ENCFF581ABM 81 bp overlap
TRIM22 3 datasets
ChIP GM12878 ENCFF919OMX 186 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 186 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 186 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 186 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 150 bp overlap
ZNF18 1 dataset
ChIP HEK293 GSE76494.ZNF18.HEK293 171 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 133 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 153 bp overlap
ZNF217 2 datasets
ChIP GM12878 ENCFF978IGL 186 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 186 bp overlap
ZNF24 2 datasets
ChIP GM12878 ENCFF688STO 100 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 174 bp overlap
ZNF501 1 dataset
ChIP HepG2 ENCFF879XZR 66 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCFF233SGE 186 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 186 bp overlap
ZSCAN29 1 dataset
ChIP GM12878 ENCFF983OKU 172 bp overlap
ZSCAN30 1 dataset
ChIP HepG2 ENCFF093LBM 186 bp overlap