chr4 : 123,115,058 123,115,667
609 bp 96 TFs 0 linked genes
This 609 bp open chromatin element has no linked target genes and is bound by 96 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:123,110,058 – 123,120,667
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP K-562 ENCSR641BSL.AGO1.K-562 219 bp overlap
AR 8 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 128 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 161 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 147 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 164 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 345 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 601 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 226 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 470 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 463 bp overlap
ATF1 2 datasets
ChIP WTC11 ENCFF354DFT 447 bp overlap
ChIP WTC11 ENCFF354DFT 410 bp overlap
BHLHE22 3 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_24h DE_24h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 6 datasets
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 197 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 240 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 522 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 539 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 558 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CTCF 51 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 334 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 148 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 293 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 130 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 106 bp overlap
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GM23338 ENCFF832KWE 569 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 78 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 222 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 317 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 230 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 223 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 191 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 251 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HFFc6 ENCFF005CJI 514 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 190 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 225 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 273 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 139 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 147 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 133 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 163 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 359 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 472 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 529 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 272 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 175 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 177 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 219 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 144 bp overlap
ChIP endodermal cell ENCFF471YCZ 183 bp overlap
ChIP endodermal cell ENCFF471YCZ 284 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 334 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 405 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 272 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 209 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 218 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 298 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 221 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 222 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 272 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 292 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF262VBH 381 bp overlap
ChIP BLaER1 ENCFF896HSY 245 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 550 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 135 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 296 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 127 bp overlap
ERG 3 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 331 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 368 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 105 bp overlap
ESR1 8 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 349 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 153 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 402 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 205 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 223 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 159 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 513 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 205 bp overlap
FIP1L1 2 datasets
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 212 bp overlap
ChIP K-562 GSE120104.FIP1L1.K-562 186 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 437 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 189 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 378 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 56 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 97 bp overlap
GLI3 2 datasets
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
GLIS1 2 datasets
Motif DE_12h DE_12h-GLIS1_MA0735.2 15 bp overlap
Motif ES_0h ES_0h-GLIS1_MA0735.2 15 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 68 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 69 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 469 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 187 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 164 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
JUN 2 datasets
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 233 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 167 bp overlap
KLF9 3 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 135 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 260 bp overlap
MAF1 1 dataset
ChIP THP-1_monocytes GSE96800.MAF1.THP-1_monocytes 153 bp overlap
MECOM 2 datasets
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 133 bp overlap
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 163 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 151 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 281 bp overlap
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 318 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 464 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 194 bp overlap
Neurod2 3 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_24h DE_24h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 586 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 571 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 396 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 485 bp overlap
Olig2 3 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_24h DE_24h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 224 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 190 bp overlap
PKNOX1 2 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 569 bp overlap
ChIP K562 ENCFF648YPL 572 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 177 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 324 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 168 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 232 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 398 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 100 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 227 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 171 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 163 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 243 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 150 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 144 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 257 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 609 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 609 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 442 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 479 bp overlap
RUNX1 1 dataset
ChIP AML GSE111821.RUNX1.AML 141 bp overlap
RUNX1T1 3 datasets
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 410 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 214 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 263 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 420 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 218 bp overlap
SPI1 1 dataset
ChIP macrophage_IL4 GSE47188.SPI1.macrophage_IL4 292 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 609 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 379 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 575 bp overlap
Spz1 2 datasets
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Motif ES_0h ES_0h-Spz1_MA0111.1 11 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 186 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 104 bp overlap
TEAD4 2 datasets
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 98 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 165 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 490 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 111 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 161 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 318 bp overlap
TRIM28 3 datasets
ChIP AF22 GSE84259.TRIM28.AF22 272 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 261 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 216 bp overlap
Tcf12 3 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_24h DE_24h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 3 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_24h DE_24h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 432 bp overlap
YY1 1 dataset
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 208 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 609 bp overlap
ChIP K562 ENCFF427SDV 467 bp overlap
ChIP K562 ENCFF875HLX 280 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 332 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 171 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 337 bp overlap
ZNF213 3 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
ZNF76 2 datasets
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Zic1::Zic2 3 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 3 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap