chr4 : 86,940,125 – 86,940,499
374 bp 77 TFs 3 linked genes
This 374 bp open chromatin element is linked to ENSG00000284968, AFF1, and C4orf36 and is bound by 77 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000284968 3.9 kb Proximal Proximity
AFF1 5.1 kb Proximal Proximity
C4orf36 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:86,935,125 – 86,945,499
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AHR 1 dataset
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 117 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 240 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 123 bp overlap
ARNT 2 datasets
ChIP GM12878 ENCFF831TWO 203 bp overlap
ChIP GM12878 ENCSR590KEQ.ARNT.GM12878 72 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCFF143PXG 205 bp overlap
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 117 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCFF576UEQ 185 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCFF854PAY 82 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 57 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 53 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 145 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 294 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 125 bp overlap
BRD4 7 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 256 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 275 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 264 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 51 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 194 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 281 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 209 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCFF542UDC 50 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 50 bp overlap
CEBPA 2 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 92 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 124 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 215 bp overlap
ChIP IMR-90 ENCFF468UGY 186 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 105 bp overlap
CTCF 1 dataset
ChIP KMS-11 ENCFF853JKX 274 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF031ISE 192 bp overlap
ChIP BLaER1 ENCFF274GAT 244 bp overlap
ChIP BLaER1 ENCFF364PUR 202 bp overlap
ChIP BLaER1 ENCFF460KDD 250 bp overlap
ChIP BLaER1 ENCFF798NMV 174 bp overlap
DPF2 4 datasets
ChIP GM12878 ENCFF681AJV 149 bp overlap
ChIP GM12878 ENCFF681AJV 355 bp overlap
ChIP GM12878 ENCFF681AJV 374 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 324 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF347NRI 75 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 56 bp overlap
FOXA1 1 dataset
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 77 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 224 bp overlap
ChIP DE DE-FOXA2-2 218 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 205 bp overlap
FOXP1 1 dataset
ChIP U2932 ERP010999.FOXP1.U2932 134 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 173 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 291 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 260 bp overlap
GATA6 3 datasets
ChIP AGS GSE51705.GATA6.AGS 197 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 338 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 280 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCFF781IAU 119 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 153 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 274 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 146 bp overlap
HNF4A 4 datasets
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 166 bp overlap
ChIP liver ENCFF354NRH 239 bp overlap
ChIP liver ENCFF449HPV 248 bp overlap
ChIP liver ERP002306.HNF4A.liver 180 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF824TGK 362 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 192 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF238LYK 127 bp overlap
ChIP GM12878 ENCFF238LYK 337 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 108 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 109 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 134 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 172 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 108 bp overlap
KMT2A 3 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 252 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 138 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 165 bp overlap
MED1 3 datasets
ChIP GM12878 GSE93080.MED1.GM12878 114 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 250 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 271 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 73 bp overlap
MTA2 3 datasets
ChIP GM12878 ENCFF615CWQ 119 bp overlap
ChIP GM12878 ENCFF615CWQ 321 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 50 bp overlap
MTA3 3 datasets
ChIP GM12878 ENCFF681QPL 67 bp overlap
ChIP GM12878 ENCFF681QPL 296 bp overlap
ChIP K-562 ENCSR180NCY.MTA3.K-562 274 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 267 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 121 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCFF023CAZ 236 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 69 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 86 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 84 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 324 bp overlap
ChIP OCI-Ly7 GSE69558.PAX5.OCI-Ly7 52 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCFF589FCY 65 bp overlap
PML 2 datasets
ChIP GM12878 ENCFF160JQZ 169 bp overlap
ChIP GM12878 ENCFF160JQZ 371 bp overlap
POLR2A 9 datasets
ChIP GM12878 ENCFF263VRI 70 bp overlap
ChIP GM12878 ENCFF412KAE 99 bp overlap
ChIP GM12891 ENCFF012SUT 124 bp overlap
ChIP GM12891 ENCFF127ICP 74 bp overlap
ChIP GM12891 ENCFF379FCI 69 bp overlap
ChIP GM12892 ENCFF245LYF 142 bp overlap
ChIP GM12892 ENCFF506PGQ 72 bp overlap
ChIP GM18505 ENCFF311CYB 68 bp overlap
ChIP GM18951 ENCFF079KKO 56 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 253 bp overlap
RAD21 2 datasets
ChIP lymphoblast GSE155324.RAD21.lymphoblast 64 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 133 bp overlap
RELA 8 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 184 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 210 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 217 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 215 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 163 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 200 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 189 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 72 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 151 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 183 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 82 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 139 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 135 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 127 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 306 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 309 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 118 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 206 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 206 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 55 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 242 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 337 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 129 bp overlap
TCF3 3 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 140 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 163 bp overlap
ChIP Ramos GSE139810.TCF3.Ramos 268 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 52 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCFF919OMX 50 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 151 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 127 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 207 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 206 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 372 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 227 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 109 bp overlap
ZNF121 8 datasets
ChIP HEK293 ENCFF839FUF 59 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 122 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 345 bp overlap
ChIP Hep-G2 ENCSR945QEW.ZNF121.Hep-G2 374 bp overlap
ChIP HepG2 ENCFF343YSL 322 bp overlap
ChIP K562 ENCFF314GND 239 bp overlap
ChIP WTC11 ENCFF291API 106 bp overlap
ChIP WTC11 ENCFF291API 183 bp overlap
ZNF217 2 datasets
ChIP GM12878 ENCFF978IGL 70 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 58 bp overlap
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