chr4 : 79,651,597 – 79,651,823
226 bp 81 TFs 0 linked genes
This 226 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:79,646,597 – 79,656,823
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 226 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 91 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 105 bp overlap
BRD4 8 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 226 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 100 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 226 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 226 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 177 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 226 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 189 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 65 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 226 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 159 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 183 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 110 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 226 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 223 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 226 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 226 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 187 bp overlap
ESR1 7 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 148 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 226 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 181 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 226 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 63 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 226 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 106 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 53 bp overlap
FOSL2 1 dataset
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 226 bp overlap
FOXA1 4 datasets
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 102 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 222 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 112 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 120 bp overlap
FOXA2 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 174 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 226 bp overlap
GATA6 1 dataset
ChIP OACP4-C GSE132680.GATA6.OACP4-C 226 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 93 bp overlap
HNF1A 1 dataset
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 117 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 226 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 226 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 226 bp overlap
JUN 10 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 223 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 226 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 226 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 226 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 226 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 226 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 226 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 147 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 226 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 226 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 180 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 92 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MED1 2 datasets
ChIP VCaP GSE148358.MED1.VCaP 226 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 160 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 226 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 107 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 226 bp overlap
ChIP H1 ENCFF747ZPQ 174 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 226 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 226 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 223 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 226 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 226 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 226 bp overlap
ChIP hESC GSE18292.NANOG.hESC 117 bp overlap
ChIP hESC GSE20650.NANOG.hESC 226 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NIPBL 1 dataset
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 218 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 99 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 126 bp overlap
PDX1 3 datasets
ChIP H9 ERP004206.PDX1.H9 181 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 226 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 218 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 226 bp overlap
POLR2A 1 dataset
ChIP gastroesophageal sphincter ENCFF070PCA 89 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 226 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 226 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 144 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 12 datasets
ChIP BG03 GSE21614.POU5F1.BG03 121 bp overlap
ChIP GM23338 ENCFF333SNB 226 bp overlap
ChIP H1 ENCFF698ZAP 180 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 226 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 165 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 153 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 226 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 179 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 226 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 226 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 226 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 143 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 50 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 136 bp overlap
RELA 15 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 189 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 214 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 193 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 152 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 179 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 166 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 160 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 184 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 187 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 138 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 226 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 214 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 198 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 193 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 226 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 204 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 211 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 226 bp overlap
SMARCA2 5 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 170 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 226 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 219 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 207 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 135 bp overlap
SMARCA4 6 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 226 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 177 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 226 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 226 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 226 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 226 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 226 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 226 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 226 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 226 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 226 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 184 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 226 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 226 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 186 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 186 bp overlap
TCF7L2 1 dataset
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 175 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 112 bp overlap
ChIP WTC11 ENCFF502QUV 226 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 214 bp overlap
TEAD4 3 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 155 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 168 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 175 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 226 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 226 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 213 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 226 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 138 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 174 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 54 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 226 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 223 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 226 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 172 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
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